Rhincodon typus (whale shark): 109936145
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Entry
109936145 CDS
T06055
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like
KO
K00780
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:
2.4.3.2
2.4.3.4
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00512
Mucin type O-glycan biosynthesis
rtp00533
Glycosaminoglycan biosynthesis - keratan sulfate
rtp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rtp00604
Glycosphingolipid biosynthesis - ganglio series
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
109936145
00533 Glycosaminoglycan biosynthesis - keratan sulfate
109936145
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
109936145
00604 Glycosphingolipid biosynthesis - ganglio series
109936145
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109936145
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
109936145
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
109936145
Glycosyltransferases [BR:
rtp01003
]
Terminal extension
Sialyltransferase
109936145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
GFO_IDH_MocA_C3
Toddler
Motif
Other DBs
NCBI-GeneID:
109936145
NCBI-ProteinID:
XP_048452036
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All DBs
Position
4:complement(96102278..96195311)
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AA seq
326 aa
AA seq
DB search
MFAHRLQKQQWFFYLLVFTVLLLSVAFTYTDKIEFALKKLFAVRKCKCNRCVSELNESAW
FDKRYIPTMYPILTKNSFTLPEASYKWWQRLQSERKPSNYSSIMEELFKLFPGDDKLMDQ
GPNRCRTCAVIGNSGNLKGSNYGPSIDSNNLVMRMNRAQTTGYEADVGSKTTHHFMYPES
AQNLAENVSLVLIPFKVLDIKWLISAFTAGNITRTYIPVMRHIKADKDKVLVYSPHFFKY
VYDNWNEHHGRYSSTGMLVIVFALHVCDEVNVYGFGANSLGHWHHYWEKNAGGGAFRKTG
VHDGDFEANVTKMLADVGKINLFKGT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcacaggcttcagaaacagcagtggtttttctatttgctggtttttaccgtg
ctcctgttatctgtcgcttttacttacacggacaagattgagtttgcacttaaaaaatta
ttcgctgtgagaaagtgcaaatgtaaccgttgtgtgtcagaattaaatgaatcagcgtgg
tttgacaagcgatacattcccactatgtatcccattctgaccaaaaatagcttcacactt
cctgaggcatcctataaatggtggcaaaggcttcaaagtgaaagaaagccatccaattat
agcagcatcatggaagaactatttaagctgtttccaggtgatgacaagctcatggaccag
ggaccaaacagatgtcggacctgtgcagtcataggaaattctggtaacttaaaaggatct
aactacgggccatcaattgactctaataacttagtaatgaggatgaaccgggcacagacc
actggctatgaggcggatgtaggcagtaaaactacacatcacttcatgtaccctgaaagt
gctcagaatctggcagaaaacgtttctttggttctcatcccttttaaagtattggacatc
aagtggctaattagtgcttttacagcaggcaacatcactcgtacttatataccagtgatg
cgtcacatcaaggcagataaagacaaggtattggtctacagcccacatttttttaaatat
gtttatgacaactggaatgaacaccatggaagatactcctcgactggcatgctggtcata
gtttttgcacttcatgtctgtgatgaggtgaatgtttatgggtttggagccaacagctta
ggacattggcatcattactgggagaagaatgcaggcggaggagccttcagaaaaacagga
gtacatgatggagattttgaagccaatgtcacaaagatgcttgccgatgttggtaaaata
aatttattcaaaggtacttga
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