Rhincodon typus (whale shark): 109936750
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Entry
109936750 CDS
T06055
Name
(RefSeq) homeobox protein otx5-like
KO
K09337
cone-rod homeobox protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109936750
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109936750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109936750
NCBI-ProteinID:
XP_048474331
LinkDB
All DBs
Position
39:complement(4691930..4718207)
Genome browser
AA seq
290 aa
AA seq
DB search
MMSYMKQPHYAVNGLTLTGPGMDLLHSAVGYQTTPRKQRRERTTFTRAQLDILEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQNSGQAKTRPAKKKTSPTRDTS
SETNASGHYSPTPAGTAGTTSSITNANVSIWSPASISPIPDPLSSSAASCMQRSAAYPMT
YSQAQGYNQSYAGSSPYFSGLDCGPYLSPMHPQLPAPGAALSPLSTPTMGGHLSQSPASL
SAQGYGSASLAFNTVECLDYKDQSSSWKLNFGASDCLDYKDQTSWKFQVL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctatatgaagcaaccacactacgcagttaatggattgacactcactggccct
ggtatggatctcttacactctgcagttggctatcaaaccactccgaggaaacagcgccgg
gagagaacgaccttcaccagagcacagctcgatattttggaagccctctttgccaagacc
cgctaccctgacatcttcatgcgggaagaggtggctctgaagatcaatttacccgaatcc
agggttcaggtttggtttaagaaccgtcgcgcaaagtgccgccaacagcaacagcagaac
agtggccaagctaagacacggccggccaaaaagaagacctctccgacacgggacaccagc
tcagagaccaatgccagcggccattacagcccgacaccggcaggcacagctggcaccacc
agctccatcaccaacgccaacgtgtccatctggagcccagcctccatctctccgatcccg
gatccgctctcctcgtccgccgcctcgtgcatgcagcggtctgccgcctatcccatgacc
tacagccaagcccaggggtacaatcagagttacgctggttcctctccctacttcagcggc
ctggactgcggaccgtacctgtcccccatgcacccgcagctgcccgccccaggggctgcg
ctgagccctctgagtaccccgaccatgggaggtcacctgagccagtctccggcctccctg
tccgcccaaggctacggctcggccagcctggctttcaacaccgtcgagtgcctggactac
aaggaccagagctcctcctggaagctgaactttggcgccagcgactgcttggattacaag
gaccaaacctcctggaagttccaggtcttgtaa
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integrated database retrieval system
