Rhincodon typus (whale shark): 109936774
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Entry
109936774 CDS
T06055
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04020
Calcium signaling pathway
rtp04510
Focal adhesion
rtp04540
Gap junction
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109936774
04020 Calcium signaling pathway
109936774
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109936774
04540 Gap junction
109936774
09142 Cell motility
04810 Regulation of actin cytoskeleton
109936774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109936774
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109936774
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109936774
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
109936774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
109936774
NCBI-ProteinID:
XP_048466885
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All DBs
Position
23:17375199..17453952
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AA seq
244 aa
AA seq
DB search
MDLLQKTTESNMKSQLLVFLSLFCFWTAISEQMPKSIDTEEGLPEDVLRMIAQADIRSIN
DLEDLLGIEAKDPPGFKPMYKIGVPIRLGRHKGTNEHLGQKASNEGRSLSPLHLAITPEP
PPQSQPRSFIAGYSKPAGCKTRIVSVEVPRYKVDPTSVGFLLWPSCVEIQRCSGCCNTKT
YKCIPIHASYKPFQIAKVTYRYGRNELTIHTVSIREHLSCNCTELARHQPRFPPKYYRQS
ADNN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatcttttgcagaaaacaactgaaagcaacatgaaatctcagcttcttgttttctta
tctctcttctgtttctggactgccatctctgagcaaatgccaaaaagcatagatacagaa
gagggtctcccagaagacgtgctgaggatgatcgctcaagcagacattagaagtatcaat
gatctggaagacctcctgggtattgaggccaaagatcctcctggcttcaaacccatgtac
aaaataggtgtgccaattaggctggggagacacaaaggtactaatgaacaccttggacaa
aaggcaagcaatgaaggacgctcgctctcaccgcttcacctagcaataacgccagaacca
ccaccacagagccaaccaagatcatttatagcaggatattcaaaaccagctggatgcaaa
acacgaatagtttcagtagaggttcctcgatacaaagtggacccaacttcggtgggcttc
cttctgtggccttcgtgtgttgagatacagcgctgttctggctgttgtaacactaaaacc
tataaatgcattccaatacatgcaagttacaaaccctttcagatagcgaaggtgacttat
cggtatggtaggaatgagctcaccatacacactgtatcaatcagagaacatctaagctgt
aactgcacagaactggcaagacatcaaccaaggttccctccaaaatattatcgacaatca
gctgacaacaactga
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