Rhincodon typus (whale shark): 109936774
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Entry
109936774 CDS
T06055
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04020
Calcium signaling pathway
rtp04510
Focal adhesion
rtp04518
Integrin signaling
rtp04540
Gap junction
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109936774
04020 Calcium signaling pathway
109936774
09133 Signaling molecules and interaction
04518 Integrin signaling
109936774
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109936774
04540 Gap junction
109936774
09142 Cell motility
04810 Regulation of actin cytoskeleton
109936774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109936774
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109936774
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109936774
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
109936774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
109936774
NCBI-ProteinID:
XP_048466885
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All DBs
Position
23:17375199..17453952
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AA seq
244 aa
AA seq
DB search
MDLLQKTTESNMKSQLLVFLSLFCFWTAISEQMPKSIDTEEGLPEDVLRMIAQADIRSIN
DLEDLLGIEAKDPPGFKPMYKIGVPIRLGRHKGTNEHLGQKASNEGRSLSPLHLAITPEP
PPQSQPRSFIAGYSKPAGCKTRIVSVEVPRYKVDPTSVGFLLWPSCVEIQRCSGCCNTKT
YKCIPIHASYKPFQIAKVTYRYGRNELTIHTVSIREHLSCNCTELARHQPRFPPKYYRQS
ADNN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatcttttgcagaaaacaactgaaagcaacatgaaatctcagcttcttgttttctta
tctctcttctgtttctggactgccatctctgagcaaatgccaaaaagcatagatacagaa
gagggtctcccagaagacgtgctgaggatgatcgctcaagcagacattagaagtatcaat
gatctggaagacctcctgggtattgaggccaaagatcctcctggcttcaaacccatgtac
aaaataggtgtgccaattaggctggggagacacaaaggtactaatgaacaccttggacaa
aaggcaagcaatgaaggacgctcgctctcaccgcttcacctagcaataacgccagaacca
ccaccacagagccaaccaagatcatttatagcaggatattcaaaaccagctggatgcaaa
acacgaatagtttcagtagaggttcctcgatacaaagtggacccaacttcggtgggcttc
cttctgtggccttcgtgtgttgagatacagcgctgttctggctgttgtaacactaaaacc
tataaatgcattccaatacatgcaagttacaaaccctttcagatagcgaaggtgacttat
cggtatggtaggaatgagctcaccatacacactgtatcaatcagagaacatctaagctgt
aactgcacagaactggcaagacatcaaccaaggttccctccaaaatattatcgacaatca
gctgacaacaactga
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integrated database retrieval system
