Rhincodon typus (whale shark): 109937137
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Entry
109937137 CDS
T06055
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
rtp04146
Peroxisome
rtp04977
Vitamin digestion and absorption
rtp04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109937137 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109937137 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
109937137 (abcd4)
04980 Cobalamin transport and metabolism
109937137 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109937137 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109937137 (abcd4)
Enzymes [BR:
rtp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
109937137 (abcd4)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
109937137 (abcd4)
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
109937137 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
T2SSE
AAA_30
ABC_membrane_2
AAA_16
Mg_chelatase
AAA_29
NACHT
FtsK_SpoIIIE
AAA_22
DEAD
nSTAND_NTPase5
nSTAND3
AAA_7
TsaE
AAA_23
AAA_19
AAA_18
Zeta_toxin
bpMoxR
cobW
ORC-CDC6-like
AAA_SelU
RsgA_GTPase
AAA_5
NTPase_1
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
109937137
NCBI-ProteinID:
XP_048456234
LinkDB
All DBs
Position
8:12635971..12653814
Genome browser
AA seq
311 aa
AA seq
DB search
MRTNWKLQDLLQTQKELMKRELWLYIGVNVFDYLGSIISYIIIAIPIFGGQYNGLAPAAL
IELVSKNAFVSIYLIHCFSQLIDLSTTVTDLAGYTHRIGELQEMILKLSKSCCKSRQPSC
KELWGFEKDSLDSEDENKEESGGMAFNLEQVSFTALSSKELLVKNLTLTVTAGHNLLVTG
NTGSGKTTLLRVLNRLWETADGSVRMLTSFGPRGVMFLPQKPYFTDGTLREQVIYPLKEI
YPITGLPDDERIIHFLTVTGLGSLLKRTGGLDERVDWNWFDVLSPGEMQRLCFARLFYHQ
PKYADSTHCCY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgaactggaaactgcaggacctactgcaaacacagaaggagctgatgaagagg
gaactgtggctgtacattggggtgaacgtttttgattacctgggcagtatcatcagctac
atcatcatagcgattcccatctttggtggacagtacaatggtcttgcccctgcagccctt
atcgagttggtcagtaagaatgcctttgtatccatctatcttatacactgcttcagccag
ctcatcgacctctcaacaaccgtgactgacctcgcaggctacacacacagaattggagag
ctgcaagagatgatcctcaaactctccaaatcatgttgcaagagcagacagccgtcatgc
aaagaattgtggggttttgaaaaggacagtttagattctgaagacgagaacaaggaagag
tctggtggcatggcctttaatctggaacaggtttcctttactgcgctgtcctccaaggag
ttgctggtgaaaaacctaaccctgacagtcactgcaggacacaacctcttggtaacaggc
aacaccggctctggaaagaccactctgttacgggtcctgaacaggttatgggagacagcc
gatgggtctgtccgcatgctgacttcctttgggccccgtggagttatgtttcttccccag
aaaccgtacttcactgatggaaccctgcgagaacaggtgatttatcctttgaaggaaatc
tacccgattacaggtttaccggatgatgagagaatcatccacttcttaacagtgactgga
ttggggtcactactgaagaggactggtggactggatgagagagtggattggaactggttc
gacgtgctgtctcccggagaaatgcagagactgtgcttcgctcgactcttctatcaccag
cccaaatatgcagatagtacacactgctgctactga
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