Rhincodon typus (whale shark): 109938236
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Entry
109938236 CDS
T06055
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109938236 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109938236 (bdnf)
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109938236 (bdnf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
109938236
NCBI-ProteinID:
XP_048463019
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All DBs
Position
17:complement(50578530..50591835)
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AA seq
260 aa
AA seq
DB search
MAHELRRVMNILFLAMVISSCGCLQAAPMNEAVDRGASHYPGLRPYGTLAGGGGPGVAPS
RGLGALANTMGHVLEELLEVDREARPSDGGGGQGGSDKEGDLYSSRVMLSGQVPLEPPLL
FLMEEYRNYLEAANMSARVRRHSDPARRGELSVCDSISQWVTADKKKTAVDMSGQTVSVL
EKILVQNGQLKQYFYETKCNPKGFTNEGCRGIDKKHWNSQCKTSQSYVRALTMDSRRKIG
WRFIRIDTSCVCTLTFKRGR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgagttgaggagagtaatgaacatcttgttccttgctatggttatctcatcc
tgtggttgcctgcaagctgccccgatgaatgaagctgtggaccgaggcgcctcgcactac
ccggggctgcggccttacgggacactggccggcggaggggggccaggggtcgccccttcc
cggggactcggggctttggccaacacgatgggccatgtgctggaagagctcctggaggtg
gacagggaggctcggccgagcgacggcggaggtggacagggaggctcggacaaggagggc
gacttgtactcgtcacgggtgatgctgagcggccaggtgcctttggaaccgcctttgctc
ttcctgatggaggagtaccggaattacttagaggcagcgaacatgtcggccagggtgagg
cgccactcagacccagcccgcaggggagagctcagtgtctgtgatagtatcagccaatgg
gtgacggcagacaagaaaaagacagcagtggatatgtcgggccaaacggtcagcgtcctg
gagaagatcctggtccagaatggtcagctcaagcagtacttttacgagaccaaatgcaat
cccaaagggttcactaacgaaggctgcagaggaatagacaagaaacattggaactctcaa
tgcaaaaccagccaatcttacgtccgagccctcaccatggatagcaggagaaagattggg
tggagatttataaggatagacacttcctgtgtatgtacattgacctttaagagggggaga
tag
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