Rhincodon typus (whale shark): 125486182
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Entry
125486182 CDS
T06055
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125486182 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
125486182 (trim37)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125486182 (trim37)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125486182 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pilin
Motif
Other DBs
NCBI-GeneID:
125486182
NCBI-ProteinID:
XP_048468677
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All DBs
Position
26:complement(6366098..6400361)
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AA seq
570 aa
AA seq
DB search
MLVSTNHSCLSQHCRYQVRAPTFFQKCRDQNWYISQLEVAQTGYIQQVNNLKERLAIELS
RNRTAQSLSPPDTRLSPQTSDCSDTRTKKLVRNEDLPAEGACSVLAINQAKEEDEEDKTV
QDDSNHDLSDGDLDIECLTVDDELIQLDGSSSSASSTATSNTEENDIDEETMSGENDVEY
SNNMDLEEGELDDSAGASGGLSNRSRSSRRGMGSLSSAASSSLLDIDPVILIQLLDLKDR
SSMENLWGLQPRPPASLLHSAAQCRKDREQRRQQTVRRSPPNSGVLKRLKAQMAEVRSKM
SEVKSQMSEARSSTVSCADLGVNCTTHAGDQGPSGTCGIDNIRRNESGLDLLSNYITFAS
TKKCGSPKHSRPGSGTIFSLRRALECGDKDLHCQENYQPSTTGLSKPSSRQGSPHCVNKA
NDSEAPSTCKAEDRAFIVTASDQFCNTALNGLAALEMTRKVATLGSVPQCCLTDNQRSDS
DNASTAGTHASPLEGMSGRPEEVALLQKKALQLLPGMSSDSESECETEIEEQEGNMSTEL
ATHNFTTQSSGEGDLGNSGNTNFVNGDAKE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctagtctctactaatcactcttgtctgtctcaacattgcaggtaccaggtacgtgct
cctacattcttccagaagtgtcgtgaccaaaattggtacatcagccaactcgaggtggct
cagacagggtacattcagcaagtcaacaatcttaaagagcgattggccattgaactttca
cgtaacaggacagcacaaagcttgtcgccacctgatacacgcttgagtccacaaaccagt
gattgctcagacacgaggacaaaaaagcttgttcgtaatgaagatctaccagcagaggga
gcttgttcggtattagctatcaaccaggcgaaagaggaggatgaagaggacaagacagtg
caggatgattccaatcatgatctttccgatggtgatttggacatagaatgcctcactgtg
gatgatgaattgatccaacttgacggcagcagctcatctgctagttccacagcaaccagt
aatacagaggaaaatgacattgatgaggagactatgtctggagagaatgatgttgaatac
agcaacaacatggacctggaggaaggagagttggatgattcagctggagcttctggaggg
ctgagcaaccgcagtaggtcctcaagacggggcatgggcagtctgtcatctgcagccagc
agcagtctgcttgacattgacccagtcattctcatacagctgttggacctgaaagaccgg
agtagcatggaaaatttgtggggccttcaaccacgcccaccagcttccctcctgcactct
gcagctcaatgtcgaaaagatcgtgagcagcggagacagcagactgtgcgccgatcgcct
cctaattccggggttctgaagagattgaaggcccaaatggctgaggtcaggagcaaaatg
tctgaagtcaaaagtcagatgtctgaggcaagaagtagtacggtatcgtgtgctgattta
ggggtgaattgcaccactcatgcaggagatcaagggccatcagggacatgtggaattgac
aacatccggagaaatgaatctggactagatctcctttccaattacataacatttgcatct
acaaagaagtgtggatctccaaaacatagccgcccaggttcagggaccattttctctctc
cgtagagctctggaatgcggggataaagatctccactgccaagagaattatcaacccagc
acaacaggactatcaaagccaagcagtagacaaggatcaccacattgtgtaaacaaggca
aatgactcggaagccccatcaacctgtaaggctgaggacagagcttttatcgttactgca
tctgaccaattctgtaacactgcactgaatggattggcagcacttgaaatgacacgtaaa
gttgccactttagggtcagtaccccagtgctgtttaacagataaccaacgttctgattca
gataatgcaagcactgcaggaacacatgcttcacctcttgagggtatgtcgggtaggccg
gaagaagttgcattgcttcagaaaaaggcccttcaattgctgcccggtatgagcagtgac
agtgagagtgaatgtgaaactgagattgaggagcaagaagggaacatgtccacagagctt
gcgactcataacttcactactcagagttctggagaaggtgatttgggcaattctggaaac
accaattttgtcaatggagatgcaaaagagtaa
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