Rhizobium tropici: RTCIAT899_CH11385
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Entry
RTCIAT899_CH11385 CDS
T02432
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00300
Lysine biosynthesis
rtr00550
Peptidoglycan biosynthesis
rtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RTCIAT899_CH11385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RTCIAT899_CH11385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
RTCIAT899_CH11385
Enzymes [BR:
rtr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RTCIAT899_CH11385
Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
Precursor biosynthesis
Amino acid ligase
RTCIAT899_CH11385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
AGB71658
LinkDB
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Position
complement(2302872..2304335)
Genome browser
AA seq
487 aa
AA seq
DB search
MNLRDIAGNEFPELNTHIGGALGDLEISGISADSRKVAPGMVFVAVAGTKADGASFIADA
VSRGASVIVAGHAADAGNVPLLQVGEPRRFLAVAASRFYGRQPETMVAVTGTAGKTSVAS
FTRQIWAYAGHPAAMIGTTGVVSPFRNEYGALTTPDPVSLHKLLAELADEGVTHAAMEAS
SHGLDQFRLDGVKLAAAAFTNLGRDHMDYHPTVEDYMAAKMRLFRDLLPKGSPAVIFADD
VWSAQAIAAAQAAGHDVRTVGRKGDFLTLKRVEHFRHKQIAEVHVGDDIFEVHIPLAGDF
QIANALVAAGLAISTGVAAPVAMAALEKLVGASGRLELVGHTHDGALVYVDYAHKPDALE
NVLNSVRPFTTGRVIVVFGCGGDRDRGKRPIMGEIACRLADVVVVTDDNPRSEDPATIRG
EIMAAAACATEIGDRAEAIRKAVGLLKSGDTLIVAGKGHEEGQTIGSVTLPFSDHAELRK
ALEDLKS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgcgggatattgccggaaatgagtttccggaactcaacacacatattggcgga
gcgcttggcgatcttgagataagcgggatctccgccgatagccgtaaggtggcaccaggc
atggtttttgttgcggtcgccggcacgaaggcggatggagcaagtttcattgccgatgca
gtttcgcgcggtgcctcggttatagttgctggtcatgcggccgatgccggtaatgtgcca
ttgctgcaggttggcgagccgcgccggttccttgctgtcgccgcttcccgcttctacgga
cgccagcccgaaacgatggtggcggtgacgggaactgcgggcaagacctccgttgcttct
ttcacgcgccagatctgggcctatgccggccatccggccgccatgataggcacgacgggc
gtcgtttctccgttccgcaatgaatatggcgcgttgacgacacccgatccggtgtcgctg
cacaagcttctggccgaattggcggacgagggcgttacccatgcggccatggaagcatca
agccatggcctcgatcagttccggctcgacggcgtgaagctcgccgccgccgcgttcacc
aatcttggtcgcgatcacatggattaccatccgacggtcgaggactatatggcggcaaag
atgcggctgttccgcgacttgctgccgaagggatcgccggcggttattttcgcagacgat
gtttggtctgcgcaggcgattgccgccgcacaggcggccgggcatgatgtccgaactgtc
gggcgcaagggcgatttcctgacgttgaagcgcgtcgagcacttccgccataagcagatc
gccgaggtgcatgtcggcgacgacattttcgaagttcatatcccgcttgccggagatttc
cagatcgccaatgcgctggtcgccgccggtctcgcgatctcgaccggtgttgccgcgccg
gttgccatggccgcgctggagaagctggtcggtgcgtcgggccgtctggaactcgttggt
catacgcatgacggcgcgcttgtctatgtcgactatgcccataagccggatgcgcttgaa
aacgtcctgaattcggtgcgcccgttcacgacggggcgcgtcatcgtcgtcttcggctgc
ggcggcgaccgcgatcgcggcaagcgtccgatcatgggcgagatcgcctgccgtcttgcc
gatgtcgtcgttgtcaccgacgacaatccgcgctcggaagatccagcaacgatccgcggg
gaaatcatggcggccgccgcctgtgcgaccgagatcggtgatcgcgccgaagcgatccgc
aaggctgtcggcctgctgaaatccggcgacacgttgatcgtcgccggtaaggggcatgag
gaaggtcaaacgatcggcagcgttacgctgccattttccgaccatgccgagttgcgcaaa
gcattggaggatttgaagtcttga
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