Rhizobium tropici: RTCIAT899_CH15730
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Entry
RTCIAT899_CH15730 CDS
T02432
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rtr
Rhizobium tropici
Pathway
rtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RTCIAT899_CH15730 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH15730 (nth)
Enzymes [BR:
rtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RTCIAT899_CH15730 (nth)
DNA repair and recombination proteins [BR:
rtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RTCIAT899_CH15730 (nth)
Prokaryotic type
RTCIAT899_CH15730 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGB72519
LinkDB
All DBs
Position
3174249..3175028
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AA seq
259 aa
AA seq
DB search
MAIPKIKSSAQTAKKSNATAGRKPAGKSLYSKADLEEIFRRFSIQRPEPKGELEHVNPFT
LVVAVALSAQATDAGVNKATRALFAVADTPQKMLDLGEERIREYIKTIGLYRNKAKNVVA
LSEKLITDFGGEVPRTREELITLPGVGRKTANVVLSMAFGQATMAVDTHIFRIANRLLLA
PGKTPDEVEHRLMKIIPDQYLYHAHHWLILHGRYVCKARKPECERCVIADLCRSPEKTWD
IPAPLVELPPQIIGAEAAS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccaaagatcaaatccagcgcccaaaccgcgaaaaagtcaaatgcgaccgca
ggccgcaagccggcgggaaagagcctttattccaaagcggacctggaagagatcttccgg
cgcttctccatccagcggccggaacccaagggcgaactggagcacgtcaatcctttcacg
ctggtcgttgccgtggcgctttcagcgcaggcgaccgacgccggcgtcaacaaggcgacg
cgcgcccttttcgccgttgccgataccccgcagaagatgctcgatctcggcgaggagcgc
atccgcgaatatatcaagacgatcggcctttaccggaacaaggcgaaaaacgtcgtggct
ctgtcggaaaagctgatcacggatttcggcggcgaggtgccgcgcacccgtgaagaattg
atcaccctgcccggcgtcggccgcaagaccgcgaacgtcgtgctttccatggctttcggc
caggcgactatggccgtcgacacacatatcttccgcatcgccaaccggctgctattggct
ccgggcaagacgcccgacgaagtcgaacaccggcttatgaagatcattcccgaccagtat
ctctaccacgcgcaccattggctgatcctgcatggccgctatgtctgcaaggcgcgcaag
cccgaatgcgaacgctgcgtaatcgcagacctctgtcgctcgccggaaaagacctgggac
atacctgctcctctggtcgaacttccgcctcagatcatcggagctgaagcggcgagctaa
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