Rhizobium tropici: RTCIAT899_CH16825
Help
Entry
RTCIAT899_CH16825 CDS
T02432
Symbol
sucA
Name
(GenBank) oxoglutarate dehydrogenase (succinyl-transferring), E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00020
Citrate cycle (TCA cycle)
rtr00785
Lipoic acid metabolism
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
rtr01120
Microbial metabolism in diverse environments
rtr01200
Carbon metabolism
rtr01210
2-Oxocarboxylic acid metabolism
Module
rtr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RTCIAT899_CH16825 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RTCIAT899_CH16825 (sucA)
Enzymes [BR:
rtr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RTCIAT899_CH16825 (sucA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AGB72728
LinkDB
All DBs
Position
complement(3409131..3412115)
Genome browser
AA seq
994 aa
AA seq
DB search
MARQEANEQFQITSFLDGANAAYIEQLYARYEDDPSSVSDEWRSFFKALEDSPDDVRKAA
KGASWQRKNWPIPAKGDLVSALDGDWGVVEKVIETKLKAKAETAGTPASATDVLQATRDS
VRAIMMIRAYRMRGHLHAKLDPLGIAAPVEDYKELSPEAYGFTEADFDRKIFIDNVLGLE
FATVREMIGILERTYCSTLGVEFMHISNPEEKAWIQERIEGPDKGIAFNPERKKAILQKV
IEAEGYEQFLDVKFKGTKRFGLDGGESLIPALEQILKSGSQLGLREAVFGMAHRGRLNVL
SQVMGKPHRAIFHEFKGGSYAPDEVEGSGDVKYHLGASSDRDFDGAKVHVSLTANPSHLE
IVNPVVMGKARAKQDMGATQWDGDIIPLSERAKVVPLLIHGDAAFAGQGVVAEILGLSGL
RGHRVAGTMHVIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVYAAKI
ATEFRMKFHKPVVLDMFCYRRYGHNEGDEPSFTQPNMYKVIRAHSTVLQIYSQRLVSEGV
LTEGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGEWSGLHTADNADEQRRGKTAVPM
KSLKEIGRKLSEIPAGFHAHRTIQRFMENRANMVQTGEGIDWAMAEALAFGSLVVEGHKI
RLSGQDCERGTFSQRHSVLYDQETEERYIPLANLSPTQARYEVINSMLSEEAVLGFEYGY
SLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSS
ARLERYLQLCAEDNMQVANVTTPANYFHILRRQLKRDFRKPLILMTPKSLLRHKRAVSTL
AEMAGESSFHRLLWDDAELIKDGPIKLQKDNKIRRVVICSGKVYYDLLEEREKRGIDDVY
LLRIEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDAKYQR
VRYTGRPAAASPATGLMSKHLSQLAAFLEDALGG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcaagaagccaacgagcaatttcagatcacctcgttcctggatggcgccaat
gctgcctatatcgagcagctctacgcgcgctacgaggacgatccttcatcggtctccgac
gaatggcggtctttcttcaaggcgctcgaggatagccccgacgatgtgaggaaggcagcg
aagggcgcctcttggcagcgcaagaactggccgatcccggcaaagggcgatctggtttcc
gcgctcgacggcgactggggcgtggtcgaaaaggtcatcgaaaccaagctgaaggcgaag
gcggaaaccgccggtacgccggcgagcgcgaccgacgtgctgcaggcgacgcgcgacagc
gtccgcgccatcatgatgatccgcgcctatcgcatgcgcggccacctgcacgccaagctc
gatccgctcggcatcgccgctccggtcgaagactacaaggagctgtcgccggaagcctat
ggtttcaccgaggccgacttcgaccgcaagatcttcatcgacaacgtactcggcctcgaa
ttcgcgaccgttcgcgagatgatcgggatcctcgagcgcacctactgctccaccctcggc
gtcgaattcatgcatatctccaatccggaggaaaaagcatggattcaagagcgcatcgaa
ggtccggacaagggcatcgctttcaaccccgagcgcaagaaggccatcctccagaaggtc
atcgaagccgaaggctatgagcagttcctcgacgtcaagttcaagggcaccaagcgcttc
ggtctcgacggcggcgaatcgctgatcccggcgctcgaacagatcctcaagagcggcagc
cagctcggtcttcgcgaagccgtcttcggcatggctcaccgcggccgtctgaacgtgctg
tcccaggtcatgggcaaaccgcaccgcgccattttccacgagttcaagggcggctcctac
gcgccggacgaagtcgaaggctcgggcgacgtcaagtaccatctcggcgcttcttcggac
cgcgatttcgatggcgcgaaggtgcacgtctcgctgacggcaaacccgtcgcatctcgaa
atcgtcaatccggtcgtcatgggcaaggcccgcgccaagcaggacatgggcgccacccaa
tgggacggcgacatcatcccgctgtccgagcgcgccaaggtcgtgccgctgctgattcat
ggcgacgcggctttcgctggccagggcgtcgttgccgaaatcctcggtctttccggtctg
cgcggccatcgcgttgccggtacgatgcacgtcatcatcaacaaccagatcggcttcacc
accaatccggccttctcgcgttcgtcgccctatccgtccgacgtcgccaagatgatcgaa
gcgccgatcttccacgtcaacggcgacgatccggaagcggtcgtctacgccgcgaagatc
gcgaccgaattccgcatgaagttccacaagcctgtggtcctcgacatgttctgctatcgc
cgctacggccacaacgaaggcgatgaaccgtccttcacgcagccgaacatgtacaaggtc
atccgcgcccacagcacggtcctgcagatctactcgcagcggctggtcagcgaaggcgtg
ctgaccgaaggcgaagtcgaaaagatgaaggccgattggcgtgcccatctcgagcaggag
ttcgaggccggccagtcctacaagccgaacaaggccgactggctggacggcgagtggtcc
ggtctgcacacggccgacaatgccgacgaacagcgccgtggcaagacggccgtgccgatg
aagtcgctgaaggaaatcggtcgcaagctgtcggaaatcccggccggcttccacgcgcac
cgcaccatccagcgcttcatggaaaatcgcgccaacatggtgcagaccggcgagggcatc
gactgggccatggcggaagccctggcattcggttcgctcgtcgtcgaaggccacaagatc
cgtctgtccggtcaggattgcgaacgcggcaccttctcgcagcgtcattcggttctctac
gatcaggagaccgaagagcgctacattccgctcgccaatctctcgccgacccaggcccgc
tacgaagtcatcaactcgatgctctcggaagaagcggttcttggcttcgaatatggctac
tcgcttgcccgtccgaacgcgctgactctctgggaagctcagttcggcgatttcgccaac
ggcgcgcaggtcgtcttcgaccagttcatctcgtctggcgaacgcaagtggctgcgcatg
tccggcctcgtctgcctgctgccgcatggctatgaaggtcagggtccggagcactcttcg
gctcgcctggaacgctatctgcagctctgcgccgaagacaacatgcaggtcgccaacgtc
acgacgccggcgaactacttccacatcctgcgccgtcagctgaagcgcgacttccgcaag
ccgctgattctgatgacgccgaagtcgctgctgcgccacaagcgtgccgtatcgacgctc
gcggagatggccggcgaaagctcgttccaccgcctgctgtgggacgatgccgaactgatc
aaggacggcccgatcaagctgcagaaggacaacaagatccgtcgcgtcgtcatctgctcg
ggcaaggtctactacgatctcttggaagagcgcgagaagcgcggcatcgacgatgtctac
ctgctgcgcatcgaacagctctatccgttcccggccaaggcgctcatcaacgagcttagt
cgcttccgcaatgcggaaatggtctggtgccaggaagagccgaagaacatgggcgcatgg
tccttcatcgatccctatctggaatgggtgcttgcccatatcgatgccaagtaccagcgc
gttcgctacaccggccgtccggccgccgcctccccggcgacgggcctgatgtccaagcat
ctgtcgcagcttgcggcgttcctcgaggacgcgctcggcggttga
DBGET
integrated database retrieval system
