Rhizobium tropici: RTCIAT899_PB02700
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Entry
RTCIAT899_PB02700 CDS
T02432
Name
(GenBank) NolF-like resistance nodulation cell division (RND) efflux pump, MFP component
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rtr
Rhizobium tropici
Pathway
rtr01501
beta-Lactam resistance
rtr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RTCIAT899_PB02700
01503 Cationic antimicrobial peptide (CAMP) resistance
RTCIAT899_PB02700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtr03036
]
RTCIAT899_PB02700
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PB02700
01504 Antimicrobial resistance genes [BR:
rtr01504
]
RTCIAT899_PB02700
Chromosome and associated proteins [BR:
rtr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RTCIAT899_PB02700
Transporters [BR:
rtr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RTCIAT899_PB02700
Antimicrobial resistance genes [BR:
rtr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RTCIAT899_PB02700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
CzcB_C
BSH_CusB
RND-MFP_C
BSH_CzcB
HH_MFP_RND
HH_EMRA
DUF748
HH_YBHG
BSH_RND
Motif
Other DBs
NCBI-ProteinID:
AGB73764
LinkDB
All DBs
Position
pRtrCIAT899b:complement(500120..501193)
Genome browser
AA seq
357 aa
AA seq
DB search
MRKPCLLLAAVLVCAALQFPCANSMAEQAAAPALTVSLTAPAIRDWPETVPASGWLKPWQ
EAIIASETSGLRITDVLADVGSVVTKGQTLARLSQESVLADLRKQEAAVVTAKANLTKAK
ANADRARQLSTSGALADEKITGYLADEQTATASLTSEEAALDSEKIKLAQTTITAADDGL
ITSRSADLGAVVSTGTELFRMVRQQRVEWQAEVSARYLPRISEGLSVRINGPEGHVIAGK
VRLVGPSVSTDTSRAIVYVALPADIRPRTGLYVTGSIELQTTPALTVPETAIVFRDGISY
VFTAGEDKRVRRVRVETGRRNNGEVEIVFGIDRSSKVVTSGGAFLSDNDLVKIAEKN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaaaccgtgtcttctactcgctgccgttcttgtctgtgcagcactccagtttccc
tgcgccaatagcatggctgaacaggcggccgcacccgctctgacggtttctctgacggcg
ccggcaatacgggactggccggagaccgttcccgcgagcggctggttgaagccctggcag
gaagcaatcatcgcgtccgaaacgagtggcctgcgcatcaccgacgtcctggcggatgtc
gggtccgtggtcacgaaggggcagacgctggcccggctttcgcaggagagcgtgctggcg
gaccttcgcaagcaggaggcggctgtcgtgactgccaaggcaaatctgacaaaggccaag
gcgaatgcggatcgtgcacgccagctcagcacttcgggggccctcgccgacgagaaaatc
actggatatctggccgacgagcagacggcgacggcaagcctgacatccgaggaagccgcg
ctcgacagtgaaaagatcaagcttgcgcagacgactatcaccgccgccgacgatggcctc
ataacctcgcgttcggccgatctcggcgccgtcgtctccaccggcaccgagctgttccgc
atggtgcgccagcagcgtgtcgaatggcaggccgaagtatcggcgcgttatctgccgcgc
atttcggaaggcttgagcgttaggatcaacgggccggaaggtcacgtcattgccggcaag
gtgcggcttgtcggaccctcggtcagcaccgacaccagccgggcgatcgtctatgtcgcg
cttcccgccgacattcgtccgcggaccggcctctacgtcacgggcagcatcgagttgcag
accacaccggcgctcaccgtccccgagaccgcaatcgtgttccgggatggcatcagctac
gtcttcaccgccggcgaggacaagcgggtgcgacgggtccgcgtcgaaaccggccgccgc
aacaatggtgaagtcgagatcgtcttcggcatcgatcggtcgtcgaaggtcgtgacgtca
ggcggtgcctttctgtcggacaatgacctcgtgaagattgcggagaagaactga
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