Rhizobium tumorigenes: PR017_09255
Help
Entry
PR017_09255 CDS
T08990
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00300
Lysine biosynthesis
rtu00550
Peptidoglycan biosynthesis
rtu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PR017_09255
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PR017_09255
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtu01011
]
PR017_09255
Enzymes [BR:
rtu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PR017_09255
Peptidoglycan biosynthesis and degradation proteins [BR:
rtu01011
]
Precursor biosynthesis
Amino acid ligase
PR017_09255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
DUF4910
Motif
Other DBs
NCBI-ProteinID:
WFR94038
UniProt:
A0AAF1KCP8
LinkDB
All DBs
Position
complement(1870827..1872290)
Genome browser
AA seq
487 aa
AA seq
DB search
MKLRDLVGTEFPELNGPVGGSLGDIDITGLSADSRQITPGMAFVAVAGSKADGAAFVADA
AARGAAVIFAQHVADTDKVPVVAVSEPRRLLALAAARFFGRQPETMVAVTGTAGKTSVAS
FTRQIWAHAGSTAAMIGTTGVISPSRNDYGSLTTPDPVSLHKLLAELADEGVTHAAMEAS
SHGLDQFRLDGVRLKAAGFTNLGRDHMDYHPTVEAYMAAKMRLFDTLLPQGSPAVIFADD
AWSDQAIAAARQAGHDIRTVGRKGNFLTLKRVEHSRHKQVAEVHFGTEIFEVHIPLAGDF
QIANALVAAGLAISTGVPAAVAMQALEKLQGASGRLELIGQTRNGALAYVDYAHKPDALE
NVLAAVRPFTTGRVIVVFGCGGDRDRGKRPIMGEIACRLADVVIVTDDNPRSEQPAAIRA
EIMAAATSATEIADRAEAIRAAVDMLKAGDTLIVAGKGHEEGQTVAGVTLPFSDHAEVRR
ALGETTT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcgtgatctcgtcgggaccgagtttcccgagttgaacggaccggtcggcggc
tcgctgggcgacatcgacatcacgggtctttccgccgacagccggcagattacgccggga
atggcctttgtcgcggttgccggcagcaaagccgatggcgccgccttcgttgccgatgct
gctgcgcgcggcgccgcggtaattttcgcccagcatgtagccgataccgataaggttccc
gttgttgccgtgtccgagccgcgccgcctgttggcgctggcagccgcgcgcttttttggg
cgccagccggaaaccatggtcgccgtcacgggtacggccggcaagacctccgttgcctcc
ttcacccgccagatctgggcacatgccggaagcaccgccgcaatgatcggcacgaccggc
gtcatctcccccagccgcaacgactatggctcgctgacgacgccggatccggtgtcgctg
cacaaactgctggccgagcttgccgacgagggcgtgacccatgccgcgatggaagcatcc
agccatgggcttgaccagttccgtctcgatggtgtgcgtctcaaggctgctggctttacc
aatctcggccgcgatcacatggactatcacccgaccgtggaggcctatatggccgccaag
atgcggctgttcgatacgctgctgccgcagggatcgccggccgttatctttgccgacgac
gcatggtcggatcaggccatagccgcagcccggcaggcaggccacgacatccgcaccgtt
ggccgcaagggcaatttcctgacgctgaagcgggtcgagcattcgcgccacaagcaggtc
gccgaggtgcatttcggcaccgagatcttcgaggttcacattccgctcgccggcgatttc
cagattgccaatgcgctggttgcagccggccttgcgatctcgaccggcgttccggcagcc
gtggcgatgcaggcgctggaaaaactccagggagcttccggtcgtcttgagctgatcggc
cagacgcgcaacggcgcgcttgcctatgtcgattacgcccacaagccggatgcgctggaa
aacgtgcttgcggctgtgcgaccctttaccaccggtcgtgtcatcgtggtctttggctgc
ggtggcgaccgggatcgcggcaagcggccgatcatgggcgagatcgcctgccggctggcc
gacgtggtcatcgtcaccgacgacaatccgcgttctgaacaaccggctgccattcgcgcc
gaaatcatggctgcggccacctcagctacggaaatcgcggaccgtgccgaggctatccgc
gccgcagtcgacatgctgaaggccggcgatacgctgatcgtggccggcaaggggcacgag
gaaggccagacggtcgccggtgtcaccttgccgttctcggatcatgcggaagtgcgccgg
gcactaggggagacgacaacttga
DBGET
integrated database retrieval system
