Rhizobium tumorigenes: PR017_10925
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Entry
PR017_10925 CDS
T08990
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu01501
beta-Lactam resistance
rtu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PR017_10925
01503 Cationic antimicrobial peptide (CAMP) resistance
PR017_10925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtu02000
]
PR017_10925
01504 Antimicrobial resistance genes [BR:
rtu01504
]
PR017_10925
Transporters [BR:
rtu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PR017_10925
Antimicrobial resistance genes [BR:
rtu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PR017_10925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
YrhK
Orf78
Motif
Other DBs
NCBI-ProteinID:
WFR94350
UniProt:
A0AAF1KCM1
LinkDB
All DBs
Position
2213009..2216323
Genome browser
AA seq
1104 aa
AA seq
DB search
MNFSAWSIRNPVAPLLAFVLLLFVGVQAFNKLPITRFPNIDVPVVNITVTQNGASPAELE
MQVTKEIEDAVASINGIDEIQSTINDGVSQTVVVFRLEVPTQQAVQDTKDAVDRIRGNLP
GNVDEPIVSKVDVEGQAIQTFAVSSPNMTLEELSWFVDDTVKRSLQGQKGIGRVDRYGGA
NREVRIELDPDKLNAHGITALSVNQQLRGTNIDLGSGRGQVAGSEQAIRVLGDARDVAQL
ADTTIALSNGRFVKLSDLGAIKDTYEEPKSFSRFNNNPVVTFGVFRAKGASEVSVAKTVS
ESLAKVRTENPNVSIELIDDSVYFTFGNYEAAIDTLMEGALLAVIVVFLFLKNWRATLIS
AIALPLSAIPTFWIMDLMGFSLNLVSFLALTLATGILVDDAIVEIENIARHIKMGKTPYR
AAIEAADEIGLAVIATTFTIIAVFVPVSFMPGIPGQYFIQFGLTVAFSVFFSLLVARLIT
PMMAAYLMRAEDGMDDHHDNDGRMMRGYTRMIRVTTRWRYTTLLAAIAFLIGSVYFLFQV
PGSFLPPDDASRIVLSVELPPNARLDDTDKATDAVYKRVKDIAGVESVFVLGGASPKGDL
ELRRATVTLGLFKRDQSLVTRLVNDVVGSIPVIGPHLPKVTPKGRVRPQWDIEKEVFAKL
RDIPDVRITKLNDRGERDLSFNFLSRSATDLNGAIATLESKLRADPLLANVSPDGALPRP
ELQIHPRKDEAARLGITPQAISDTLRVATIGDSDSLLAKISLDDRQIPIRVQASLDMRRD
LAAIRALRIQTATGGTVPLSTVADIDYSEGLSSIKRNNRYRVVSIGADLPQGVALNSASD
RFRQIVADAKIPASVHLAESGDAKVQNEMQQGFINAMLLGLLLVLSVLILLFKDVIQPFT
ILFSLPLAIGGVAAALIVTHNPLSMPVLIGILMLMGIVTKNAILLVDFAIEMMHKGMPRV
EAMVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSFRAPMAIAVIGGIIVSTVLSLIV
VPSFFLIMDDLSRLLGWIFGRLVGRRDADDVVVTQESLAADMAANRAELTDLERRFERLE
QKDRSHRAGDDKRNILNLPPHAAE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctccgcctggtccatccgcaatcccgtcgcaccgctgctggcgttcgttctg
ctgctgttcgtcggcgtgcaagctttcaacaagctgccgatcacccgttttccgaacatc
gacgtgcccgtcgtcaacatcaccgtcacccagaacggcgcctctccggccgaactggaa
atgcaggtgaccaaggagatcgaggacgccgtcgccagcatcaatggcatcgacgaaatc
caatcgacgatcaatgacggcgtttcccagacggtcgtggtattccgtctcgaagtgccg
acccagcaggccgtccaggacaccaaggacgccgtcgaccgtatccgcggcaacctgccg
ggcaacgtggacgaaccgatcgtatccaaggtcgatgtcgaaggccaggcgatccagacc
tttgcggtctcctctcccaatatgacgctcgaggaactctcgtggttcgtcgacgacacc
gtgaagcgttcgcttcagggccagaagggcatcggccgcgtcgaccgatacggcggtgcg
aaccgcgaggtgcggatcgagctcgatcccgacaagctgaacgcccatggcatcaccgcg
ctcagcgtcaaccagcaactgcgcggcaccaacatcgatctcggctcaggccgtggccaa
gtggccggatcagagcaggcaatccgcgtgctcggcgatgcccgcgacgtggcccagctt
gcggataccacgattgcgctttcaaacgggcgcttcgtcaagctgtccgacctcggcgcg
atcaaggatacctatgaggagccgaaatccttctcgcgcttcaacaacaatccggtggtc
acgttcggcgtcttccgcgccaagggtgccagcgaagtcagcgtcgccaagaccgtgtcc
gaaagccttgccaaggtcaggacggaaaacccgaacgtcagcatcgagctgatcgacgat
tcggtctacttcacctttggcaactacgaggcggccatcgacacgttgatggaaggcgcg
ctgctcgccgtcatcgtcgtgttcctgttcctgaagaactggcgcgcaacgctgatctcg
gccatcgccctccccctgtcggccattcccaccttctggatcatggacctgatgggcttc
tcgctcaatctggtgagcttcctcgcactgacgctggcgaccggtatcctcgtcgacgac
gccatcgtcgagatcgaaaatattgcccgccacatcaagatgggcaagacaccatatcgt
gcggctatcgaggcggccgatgaaattggcctggcggtcattgccaccaccttcaccatc
atcgccgtgtttgtgcccgtctccttcatgccggggatccccggccagtatttcatccag
ttcggcctcaccgtcgccttctccgtgttcttctcgctgctggtcgcccggctcatcacg
ccgatgatggcggcctacctgatgcgtgccgaagacggcatggacgatcatcacgacaat
gacgggcgcatgatgcgcggctacacgcggatgatccgggttacgacgcgctggcgctac
acgacgctgctggcggccatcgccttcctgatcgggtccgtctattttctcttccaggtg
ccgggcagcttcctgccgccggacgatgcctcgcggatcgtgctctccgtcgaactgcca
ccgaatgcccgcctcgacgacaccgacaaggcaaccgacgccgtctacaagcgggtcaag
gacatcgccggcgtcgaaagtgtcttcgtgctcggcggagcgtctccgaagggcgacctg
gaactgcgccgcgcgaccgtgacgctcgggcttttcaagcgcgaccagtcgctggtaacg
aggctggtcaacgacgtcgtcggctccataccggttatcggcccgcatttgccaaaggta
acaccaaagggccgcgtccgtccgcagtgggatatcgagaaggaagtctttgccaagctg
cgcgatatcccggatgtccggatcaccaagctgaacgaccgcggcgaacgcgacctgtcg
ttcaacttcctatcacgcagcgcaaccgatctcaacggcgccatcgccacgctggaatcg
aagctgcgcgccgatccgcttttggcaaacgtcagccccgatggcgccttgccgcgtccg
gaactgcagatccatccgcgcaaggacgaggctgcccggctcggcatcacgccgcaggcg
atatccgacaccttgcgggtagcgaccatcggtgacagcgattcgctgcttgcgaagatc
tcgctcgacgaccgccagattccgatccgcgtccaggcatctctcgacatgcggcgcgat
ctcgccgccatccgcgcactcaggatccagacggcaaccggtggcacagtgccgctatcg
accgtggccgacatcgactattccgaaggcctgagctcgatcaagcgcaacaaccgttac
cgcgtcgtctccatcggcgccgacctgccgcagggggtcgcgctgaacagtgcgtcagac
cgtttccgtcagattgtcgccgacgcgaaaattccggcaagtgtccatctcgccgaaagc
ggcgacgcgaaggtacagaacgaaatgcagcaaggcttcatcaatgccatgctgctcggg
ctgctgctggtgctttctgtgctgatcctgctgttcaaggatgtcatccagcccttcacc
atcctgttctcgctgccgctcgccatcggcggcgtcgcagccgcgctgatcgtcacccac
aacccgctgtcgatgccggtgctgatcggtattctcatgctgatgggcatcgtcaccaaa
aacgccatcctgctcgtcgatttcgccattgagatgatgcacaagggcatgccccgcgtc
gaagccatggtcgaagccggacgcaagcgcgcgcggccgatcatcatgacctcgattgcc
atgtcggccggcatgctgccctcggcgttgggcgtcggcgaaggcggctcgttccgcgca
ccgatggcgattgccgtcatcggcggcatcatcgtctcgaccgtgctgagcctgatcgtc
gtcccgtccttcttcctgatcatggacgatctgtcgcgcctgctcggctggatcttcgga
cggctggttggtcgcagggacgccgatgacgtggtcgttacccaggaaagcctcgcagct
gacatggcggcgaaccgggcggaactcaccgatctggagcggcgtttcgagcggctggag
cagaaggatcgctcccaccgggcgggcgacgataaacggaatatcctgaacttaccgcct
cacgccgctgaataa
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