Rathayibacter toxicus 70137: TI83_05770 Help Entry TI83_05770        CDS       T03670                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rtx  Rathayibacter toxicus 70137 Pathway rtx03030   DNA replication rtx03410   Base excision repair rtx03420   Nucleotide excision repair rtx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rtx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     TI83_05770    03410 Base excision repair     TI83_05770    03420 Nucleotide excision repair     TI83_05770    03430 Mismatch repair     TI83_05770  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rtx03032]     TI83_05770    03400 DNA repair and recombination proteins [BR:rtx03400]     TI83_05770 Enzymes [BR:rtx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      TI83_05770 DNA replication proteins [BR:rtx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      TI83_05770 DNA repair and recombination proteins [BR:rtx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      TI83_05770    NER (nucleotide excision repair)     GGR (global genome repair) factors      TI83_05770    MMR (mismatch excision repair)     DNA ligase      TI83_05770   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       TI83_05770 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 DNA_ligase_ZBD BRCT HHH_5 HHH Nlig-Ia PTCB-BRCT RNA_lig_T4_1 Motif Other DBs NCBI-ProteinID:  AJM77579 UniProt:  A0A2S5Y756 LinkDB All DBs Position 1272941..1275295 Genome browser AA seq 784 aa AA seqDB search MDSAVSARVEELRARIRIASAEYYEGDVSSLSDAEYDALVHELADLETRYPELVSDDSPT QIVGGGVGVGLAPVEHAERMLSLDNVFSAEDLREWCDKTVASSGRPIRWLTELKIDGLAL SLRYEHGTLVTSATRGDGLTGEDVTVNALHVPGIPQYLAGEGHPALVEIRGEVFIPVAAF AELNVLQERLREEAVEEARSSWASRPSAARKPFDEDKARVAALRRFPTFANPRNAASGGL RQQLDKKAGLDLRAGQERVRSLALYVHGMGAWPDPPVASQSEVYRLLAGWGLPVSKHNRV VDSVEEVLEFVERYVRERHTVEHEIDGVVVKVDELALHDELGATSRAPRWAIAYKYPPEE VYTRLLDIVVSVGRTGRATPFAQMEKVKVAGSEVRQATLHNADVVKVKGVLIGDTVVLRK AGDVIPEILGPVVALRDGSERAFVMPTQCPECGTTLAPAKESDVDLRCPNAESCPAQVRG RVEHIGSRGALDIEALGAVSAAALTQPRMPVDPPLRTEAGLFELTVADLFPIEVVVRDAD TGLVKLDDSGQPKVVTPFRRKRESAKDGSFNPDLPFAGDAVSVPSLNAHRLIENIDRAKT KELWRLLVALSIRHVGPVAARALAAYFGSLDAIRAASREELAAVDGVGEIIADALLAWCE VDWHLEIVERWSAAGVRFSTPGHPGPGAAENEGGVLAGLTVVVTGALEGYSREQAQEAIL RAGGKAGSSVSKKTDYVAAGTGAGSKLGKAEQLGVRIITAEEFHLLVTEGPQAITSLAEE TTRS NT seq 2355 nt NT seq  +upstreamnt  +downstreamnt atggactctgctgtgtcagcgcgcgtcgaggagctgcgcgcgcgcatccgtatcgcgagc gccgaatattacgagggcgacgtctcctccctttctgatgccgagtacgacgctctggtg cacgaactcgcagacctggagaccaggtatcccgaacttgtcagtgacgattcgccgact cagatcgtcggtggcggcgttggcgtcggcctcgccccggtcgaacatgcggagcggatg ctctcgctcgacaacgtgttttcggccgaggacttgcgggagtggtgtgacaaaacggtc gcctcgtccggccgcccgatccggtggctgacggaactcaagattgacggcttggcgctc tctttgcgttacgagcacggcacccttgtcacctcggcgacccggggcgacggtcttact ggcgaagatgtgaccgtcaacgcgttgcatgtgccgggtatcccgcagtatctggcaggc gagggccacccggcactggtcgagatacgcggcgaggtcttcatcccggtcgcggcattc gccgagttaaatgtcctgcaggagcgtctccgcgaggaggcggttgaggaggcccgatca agctgggcctcccgcccgagcgcagctcgcaagcctttcgacgaagacaaagcccgtgtt gccgcactgcgtcgctttccgacgtttgccaatccgcgcaacgctgcgagcgggggtctg cgtcaacagctcgacaagaaggcagggctcgatctgcgtgcggggcaggagcgtgtgcgt tcgcttgcactttatgtgcacggcatgggcgcttggcccgatccgccggtggcaagccaa tccgaggtgtatcgccttctggcaggttgggggttgccggtcagtaaacacaatcgggtc gttgactcggttgaggaggtcctggagttcgtcgagcgctatgtgcgtgaacggcacacg gtcgagcacgaaattgacggtgtggtggtgaaggtcgacgagctcgccctgcacgacgaa ctcggcgccactagcagggctccgcgctgggcaattgcgtacaaatacccgcccgaagag gtgtataccagactgctcgacatcgtggtgagtgtcgggcgcaccgggcgagcgactcct ttcgcgcagatggaaaaggtcaaggtggccggctcggaggtgcgacaagcgaccctgcac aacgctgatgtggtcaaggtcaagggcgtgctgatcggcgacacggtggtcctgcgtaag gcgggcgatgttattcccgagatactcggtccggtcgttgcgctgcgtgacggcagcgag cgagcgtttgtgatgccgacgcagtgccccgagtgtggaacgacactggctccggcgaaa gagagcgatgtcgatctccgctgtcccaacgctgaatcctgcccggctcaggtgcgtgga cgtgttgagcacatcggcagtaggggagcgctcgatatcgaggcgctgggcgcggtgagt gccgcggcgctcactcaaccccgaatgcctgtcgacccgccactgcgcaccgaggccggg cttttcgagttgacggtggccgacctgttccccattgaagtggttgtgcgtgacgccgac accgggctggtcaagctcgatgactccggccagcccaaggtggtcactcctttccgacgc aagcgagagtccgcgaaagatggcagttttaaccccgatctaccgttcgcgggcgatgcg gtgtcggtgccgtctcttaacgcccaccgcctgatcgagaacattgatcgcgcgaaaacc aaggagttgtggcggctgctcgttgcgctgagcattcgccacgttggaccagtcgcagcg cgtgctctcgccgcatattttggttccctcgacgcaatccgtgccgcgagccgtgaagag ctggcggctgtggacggagttggcgaaatcatcgccgacgcgctgctcgcgtggtgtgag gtcgattggcacctcgagattgtcgagcgctggtcggctgccggagtacgattctcgacg cctgggcatccggggcccggtgctgccgagaacgagggcggcgtgctcgccgggctcact gtggtggtgacgggagctctcgagggctactcacgcgagcaagctcaggaggcaatcctg cgggccggtggcaaagccggttccagtgtctcgaaaaagaccgactacgtggcggctggc accggagcggggagcaagctcggcaaggctgagcagttgggtgtacgaattatcacggca gaagagttccacctgcttgtcactgaggggccacaggcgattacctccttggcggaggag accacccgctcctga

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