Ruegeria sp. AD91A: D1823_16195
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Entry
D1823_16195 CDS
T05627
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rua
Ruegeria sp. AD91A
Pathway
rua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1823_16195 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rua03400
]
D1823_16195 (nth)
Enzymes [BR:
rua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D1823_16195 (nth)
DNA repair and recombination proteins [BR:
rua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1823_16195 (nth)
Prokaryotic type
D1823_16195 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AXT27969
UniProt:
A0A346SKQ6
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All DBs
Position
complement(3232541..3233185)
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AA seq
214 aa
AA seq
DB search
MAKQLDYHTIREIFTRFQEADPEPKGELEHVNVYTLVVAVALSAQATDAGVNKATRALFK
IADTPQKMLDLGEEGLIEHIKTIGLFRQKAKNVIKLSRILVDEYGGEVPNSRAALQSLPG
VGRKTANVVLNMWWRQPAQAVDTHIFRVGNRTGICPGKDVDTVERAIEDNIPADFQLHAH
HWLILHGRYHCKARKPQCPTCIIRDLCQFEDKTL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaactcgactatcatacgatccgcgagattttcacgcgctttcaagaggcc
gacccggaacccaagggcgagctggagcatgtgaacgtctatactctggtcgtcgccgtg
gccctttcggcgcaagccacggatgcaggcgtcaacaaagcgacgcgcgcgctgttcaag
atcgccgacacgccgcaaaagatgctggatctgggcgaggaaggcctgatcgagcacatc
aagaccattggtttgttccgccagaaggccaagaacgtcatcaagctcagccgtatcctc
gtagacgaatatggcggcgaggttcccaattcccgggctgccctgcaatcccttccgggt
gtgggccgaaagacggccaacgtggttctgaacatgtggtggcgacaaccggcgcaggcg
gtggacacccatatctttcgcgtcggcaaccgcaccggtatttgccccggcaaagatgta
gacactgtcgaacgcgccatcgaagacaatattcctgctgactttcaacttcatgcgcat
cactggttgatcctgcatggccggtaccattgcaaggcgcgcaagccgcaatgcccgacc
tgcatcatccgtgatctctgccaattcgaggacaaaaccctatga
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