Rubrobacter tropicus: GBA63_05280
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Entry
GBA63_05280 CDS
T06510
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rub
Rubrobacter tropicus
Pathway
rub00300
Lysine biosynthesis
rub00550
Peptidoglycan biosynthesis
rub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GBA63_05280
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GBA63_05280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rub01011
]
GBA63_05280
Enzymes [BR:
rub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GBA63_05280
Peptidoglycan biosynthesis and degradation proteins [BR:
rub01011
]
Precursor biosynthesis
Amino acid ligase
GBA63_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QIN85040
UniProt:
A0A6G8QEX8
LinkDB
All DBs
Position
1112572..1114029
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AA seq
485 aa
AA seq
DB search
MILDRPNLARTLGVEVPQRVDSVCGVTHDSRAVEPGFAFVAIPGFKRDGTAFAADALGRG
ASLIVAERPVPGAPTAVVPDARGALAALAREVFGDPSSKLEVYGVTGTNGKTTTSYVLHS
VLAGACGGGTCGLMSTAETIVAGERRPSVRTTPEATEVQGTLAEMLRAGVGRVVMEVSSH
GVALRRVTGTRFAGALFTNLTRDHLDLHGSMEEYFAAKRELFLWTEGPKLANAEDAWGRR
LASEVDGVLTFGGTAGADYRVEGVETAAGGTRFSLRYPEGILDLESPLLGPYNVLNVAGA
AGLALATGVESGAVATAVRGMGQVPGRFERVVAAGERGFEVIVDYAHTDVGLEAVLRVAR
GVSEGSVICVYGAAGDRDGAKRPAMGRVASLFADRGIVTTDDAYTEDPGKIAGEVAAGAD
PSRTEVELDRRAAIRRALLAARPGDVVVVAGKGHETVQHLPWGDVPFHDAKVVEELLAEM
GPNGR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctggaccgtccaaacctcgcgcggaccctcggggtcgaggtcccccaaagggtc
gattccgtctgtggcgtgacccacgattcccgcgccgtagaaccgggcttcgctttcgtg
gcgatccccggcttcaaacgcgacggaacggcgttcgccgccgatgcgctcggcaggggc
gcctctctcatcgtggccgaacgccccgtgcccggcgctccgacggccgtcgtccctgac
gccaggggtgccctggcggccctcgcccgcgaggtcttcggggacccctcctcgaagctg
gaggtctacggcgttacgggaaccaacggcaagacgaccacgtcgtacgtgctccactcc
gtcctggccggggcgtgcggcggggggacgtgcggcctgatgagcacggccgagaccatc
gtggccggggagcggaggccttcggttcggacgacgccggaggcgacggaggtgcagggg
acgctcgccgagatgctacgggcaggcgtcggacgggtggtgatggaggtctcctcccac
ggcgtcgcgctcaggcgggtaacgggcacgcgctttgccggcgcgctcttcacgaacctg
acccgagaccacctcgacctgcacggctccatggaggagtacttcgcggccaagcgcgag
ctcttcctctggacggaggggccgaagctcgccaacgcggaggacgcgtggggccgcagg
ctcgcctccgaggtcgatggcgtgctgaccttcggcgggacggcgggggcggactaccgg
gtcgaaggggtcgaaacggccgccggggggacccgtttctccctgcggtaccccgaagga
atactcgacctcgaaagcccgttgctcgggccgtacaacgtgctcaacgtggcgggggcc
gccgggctcgcgctcgccacgggcgtggagtccggggccgtcgcgacggccgtgcgtggg
atgggtcaggtgccgggccggttcgagcgggtagtggccgctggggagcgtgggttcgag
gtgatcgtggactacgcccacaccgacgtcgggctggaggccgtgttgcgggtggcccgg
ggcgtgtccgaaggaagcgtcatctgcgtctacggggccgcaggcgaccgggacggggcc
aagcggcctgcgatggggagggtggcttcgctcttcgcggaccggggcatcgtaaccacg
gacgacgcgtacaccgaggaccccggtaagatagccggggaggtcgcggccggggccgac
ccttcgcggaccgaagtcgagttggaccggcgggccgcgatccggcgcgcgctcctggcc
gcccgtccgggggacgtcgttgtggtggcgggcaaggggcacgagacggtgcagcacctc
ccctggggggacgtgccgttccacgacgccaaggtcgtcgaggagttgctggcggagatg
gggccaaacgggaggtag
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