Rubrobacter tropicus: GBA63_07885
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Entry
GBA63_07885 CDS
T06510
Name
(GenBank) DHA2 family efflux MFS transporter permease subunit
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
rub
Rubrobacter tropicus
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rub02000
]
GBA63_07885
01504 Antimicrobial resistance genes [BR:
rub01504
]
GBA63_07885
Transporters [BR:
rub02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
GBA63_07885
Antimicrobial resistance genes [BR:
rub01504
]
Gene variants
Tetracycline resistance genes
Transporters
GBA63_07885
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
GBA63_07885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
QIN85086
UniProt:
A0A6G8QF10
LinkDB
All DBs
Position
complement(1627067..1628524)
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AA seq
485 aa
AA seq
DB search
MDAEERAGQRNTRLLLIVVVTAILISVLNQTFVNVVVPDIRQDYGATQGQAGWVITGYLL
VFAVGIPLYGRIADLYSLRYTFALGLLLLAAGSLACALAPSLPLLVAGRVLQAAGASAIP
ALGFASVAKALPPGSRGTALGLLSSSVGAGAAIGPVLGGFVAGLTGWHVLFYLTLLLAAL
LIPGALYALPGTADGGSTKPAGFMAAVQHFDVPGGLSLALAAGLALFGVTQGQVVGFSSP
ISWGSFVAAGFLAAFFAWRIRAASDPFVTPHLFRNKAFLAASVTGFFMMFCNVGSLVLVP
LLLSEVNGLSAAGIGLVLAPGALVVAVLSPIAGRLSDRFGPRTLVRVGLVVIGLSTFSVS
AFAAGASAVAVAVGMLGLSVGFSMVNSPNANAAAASLSPEESGVGLGIYQMLFFLGGGFG
PAVAATFLAVRQGSESGALNPLFVASSAPFSDAFLLLTAATVVSFVAAFGLKKSVGKGGK
GGKDA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggaggagcgggcggggcaaaggaacacgcgcctgctcctcatcgtcgtcgtg
acggctatcctgatctcggttctaaaccagaccttcgtcaacgtcgtcgtcccggacatc
aggcaggactacggggcgacgcaggggcaggccggctgggtaatcacggggtacctcctc
gtcttcgccgtcggcatcccgctctacgggcgcatcgccgacctctacagcctccgctac
acgttcgccctgggcctgttgctgctcgccgccggctcgctggcctgcgcgctggcgccg
agcctgccgctgctggtcgcgggacgcgtcctgcaggccgccggtgcgtcggcgataccg
gctttgggcttcgcctccgtagccaaggcgctgccgcccgggagccggggcacggcgctc
ggcctgctctcctcgagcgtcggggcgggggccgccataggccccgtgctcggcggcttc
gtggcggggctgaccggctggcacgtcctcttctacctgacccttttgctcgccgcgctg
ctcatcccgggcgccctctacgccctgccgggcaccgccgatggcggatcgaccaagccg
gcagggtttatggcggccgtgcagcacttcgacgttccgggcggcctctcgctggcgctc
gccgccgggctcgcgctcttcggggtcacgcagggacaggtcgtcgggttctcgtccccg
atctcctggggcagcttcgtcgcggccgggttcctcgccgcgttcttcgcgtggcgcatc
cgggcggcttcggacccgttcgtcacgccccacctgtttcggaacaaggcatttctggcg
gcttcggtcacgggctttttcatgatgttctgcaacgtggggagcctggtgctcgtgccg
ctgctgctctcggaggtcaacgggttgtccgcggcgggcatcgggctggtgctcgcgccg
ggggcgctcgtcgttgccgtcctctcccccatcgcgggcaggctctcggacaggttcggg
ccgcggacgctggtgagggtggggctcgtcgtgatcgggctctcgaccttctccgtctcc
gcgttcgccgcgggggcctctgccgtggccgtggcggtcgggatgctcggcctgagcgtg
ggcttctcgatggtcaactcgccgaacgcgaacgccgcggcggcctcgttgtcccccgag
gagagcggggtcgggctcggcatctaccagatgctcttctttctgggcggcgggttcggg
ccggccgtcgccgcaaccttccttgccgtgcgtcaggggtccgaatcgggggcgctgaac
cccctcttcgtcgcgagctcagccccgttctcggacgcattcctgctcctgaccgccgcg
acggtcgtctcgttcgtcgccgctttcggcctcaagaaaagcgtagggaaaggggggaaa
gggggcaaagatgcctga
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