Ruminococcus sp. FMB-CY1: LCN94_11530
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Entry
LCN94_11530 CDS
T10118
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ruc Ruminococcus sp. FMB-CY1
Pathway
ruc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ruc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCN94_11530 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruc03400
]
LCN94_11530 (nth)
Enzymes [BR:
ruc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCN94_11530 (nth)
DNA repair and recombination proteins [BR:
ruc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCN94_11530 (nth)
Prokaryotic type
LCN94_11530 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WBX57506
LinkDB
All DBs
Position
2347014..2347640
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AA seq
208 aa
AA seq
DB search
MDKKQIALMAVNALKAEYPDAICSLVYTDPLQLLIATRLAAQCTDARVNIVTPALFERFK
TAQDFADSTPEEVAEYIKSCGLYKTKSKDIVAMAKMLCEDFDGIVPDNIDDLIKLPGIGR
KTANLVCGDIFGKPAVVVDTHCIRITKRLGLHNLKDQKKIEFALRDLLPPKESNDFCHRL
VLHGRAVCTARNAKCESCCMDGFCPKNI
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaacaaattgcccttatggctgtcaatgcgctcaaagcagagtaccccgat
gcaatttgcagccttgtatatacagaccccctgcaacttcttatagccacccgtctggct
gcgcaatgcacagatgcaagggtaaatatagttactcccgcactttttgagagatttaaa
accgcacaggactttgcagattctactcccgaagaagttgccgagtacattaaatcgtgc
ggactttataaaacaaagtcaaaagacattgtagcaatggcaaaaatgctttgcgaggat
tttgacggcattgttcccgacaatattgacgatttaataaaattaccgggtatcggcaga
aaaaccgccaatcttgtgtgcggcgatattttcggcaagcctgcggttgtagttgacacg
cattgtatacgaattaccaagcggcttggtttgcacaatttaaaagaccagaaaaaaata
gagttcgctctgcgtgatctgcttcccccaaaagaaagcaatgacttttgccacagactc
gtactccacggcagagctgtctgcacggcacgaaacgctaaatgtgaaagctgttgtatg
gacggcttttgccctaagaatatatga
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