KEGG   Rufibacter sp. DG15C: TH61_02675
Entry
TH61_02675        CDS       T04326                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rud  Rufibacter sp. DG15C
Pathway
rud03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TH61_02675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rud03400]
    TH61_02675
Enzymes [BR:rud01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TH61_02675
DNA repair and recombination proteins [BR:rud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TH61_02675
 Prokaryotic type
     TH61_02675
SSDB
Motif
Pfam: HhH-GPD HHH DUF2400 RecR_HhH Ogg-HhH ERMP1_C EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: AMM52704
UniProt: A0A127B5Y7
LinkDB
Position
complement(611000..611689)
AA seq 229 aa
MLPPKEKAWQVHLRLNEVFGLLPTYPRQDPMRELISTMLSHRTTHANEEKAYSQMLERFP
SWQQVMDAPVEELADALSPAEFPGAKAVNIQKTLRIIQQTHPDFNLAFLEQMDVSPAMDW
LMALPGVGLKTATLVLLFNFHKPVLPVDTHVHRISQRVGLIGAKVTHDKAHAILLEMFPP
DADVLYNFHRHMLKHGQKVCTFRYPKCGSCALQNLCNYYEEVRSKGIDL
NT seq 690 nt   +upstreamnt  +downstreamnt
atgctcccgcccaaagagaaagcttggcaggtacacctacggttaaacgaggtttttgga
cttctgcccacctacccccggcaggaccccatgcgtgaactcatctctaccatgctctca
cataggaccacgcacgccaatgaggaaaaggcctattcccagatgctggagcggttccca
agctggcaacaggtcatggatgcgcccgtagaggagttggcagatgcattgtcaccagct
gagtttccgggcgccaaggccgtcaacatccagaagaccttacgcatcattcagcagacc
cacccagactttaatttggcttttctggagcagatggatgtgtcccccgctatggactgg
ctcatggccttgccgggcgttgggctgaaaacggccacgctggtcctactcttcaacttt
cataagccggtcttgcccgtagacacgcacgtgcaccgcatcagtcagcgggtgggattg
attggcgctaaggtgacccatgacaaagcccacgccattctgctggagatgtttccgcca
gacgccgatgtactctacaattttcaccggcacatgctcaaacacggtcagaaagtgtgc
accttccggtatcctaagtgcgggtcttgcgccctgcagaatctctgcaattattatgaa
gaggtgcgaagcaaaggcattgacctgtaa

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