Rufibacter radiotolerans: TH63_06355 Help Entry TH63_06355        CDS       T03996                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ruf  Rufibacter radiotolerans Pathway ruf03030   DNA replication ruf03410   Base excision repair ruf03420   Nucleotide excision repair ruf03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ruf00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     TH63_06355    03410 Base excision repair     TH63_06355    03420 Nucleotide excision repair     TH63_06355    03430 Mismatch repair     TH63_06355  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ruf03032]     TH63_06355    03400 DNA repair and recombination proteins [BR:ruf03400]     TH63_06355 Enzymes [BR:ruf01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      TH63_06355 DNA replication proteins [BR:ruf03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      TH63_06355 DNA repair and recombination proteins [BR:ruf03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      TH63_06355    NER (nucleotide excision repair)     GGR (global genome repair) factors      TH63_06355    MMR (mismatch excision repair)     DNA ligase      TH63_06355   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       TH63_06355 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 BRCT_2 HHH Nlig-Ia Auto_anti-p27 HVO_2753_ZBP Motif Other DBs NCBI-ProteinID:  AKQ45341 UniProt:  A0A0H4W4J6 LinkDB All DBs Position complement(1523714..1525765) Genome browser AA seq 683 aa AA seqDB search MPEQTPEARILELTNKLNYLNYQYYQNSVSEVSDYEFDQMLLELQKLEEENPQFRSDNSP TQRVGGTITKHFPTVKHKYPMLSLSNTYSEDEVREFDTRVRKVTGDYVEYICELKFDGVA MSLTYTNGALTAGVTRGDGTRGDDITPNVRTIRTVPLHLQGEDVPAEVEVRGEVFMPFHV FEELNKEREEIGEALMANPRNATSGTLKLQDSKEVARRRLSMYAYGLLSTPTLFESHSQS LEALQRWGLNVSSSWRKCSTIEEVMAFIHEWETKRFELPIATDGIVVKVNSYAQQEELGY TAKSPRWAMAYKYKAMEAVTELLGIEYNVGRTGAVTPVALMKPVLLAGTTVKRASLHNAN EIERLGLMVHDFVTVEKGGEIIPKVTAVKTELRPANAEPIVYPSVCPSCGTALIRHEGEA NHYCPNEKGCPPQVKGKLEHFISRKAMNILSLGEGKIELLVEQGLVTSPDHLYDLTYDTL FGLKKTFVNEETGITRVVTFQKTTVENILKALEKSKEAPFDRVLFALGIRFVGNTVAQKL AQYFRNIDALRAATEEELIAVPEIGGRIAASVREYFQDLSNVHLIERLRFHGLQLDLGEI AIIEPASDKLAGLTFVVSGVFAGYSREELQDTIIANGGKIVSSISKKLSYLVAGEKMGPS KLEKATSLGVKIVTEDEFNKMLA NT seq 2052 nt NT seq  +upstreamnt  +downstreamnt atgcctgagcaaaccccagaagcccgtattttagagctgactaataaactgaactacctc aattaccaatattaccagaacagcgtctctgaggtctctgactacgagtttgaccagatg ctcctggagttgcagaagctggaagaggaaaacccgcagttccgctcagacaactcccct acccagcgcgtgggcggcaccattaccaagcacttccctactgtaaagcataaatacccc atgctctccttgagcaacacctactcagaggatgaggtgcgggagtttgacacccgcgtg cgcaaagtgaccggcgactacgtggaatacatctgcgaactcaaatttgacggcgtggcc atgagcctcacctataccaacggggccctcacggccggcgtgacgcgcggcgacggcacc cgcggcgatgacattacccccaatgtacgcaccatccggaccgtgcccttgcacctgcag ggcgaagacgttcccgccgaggtggaggtgcggggcgaggtgttcatgcctttccatgtg tttgaggaactgaacaaggagcgcgaggaaatcggcgaagcccttatggccaaccccaga aacgccacctcgggcacccttaaactgcaggactccaaagaagtggcccgccggcgccta agcatgtacgcctatggcttgctgagcacgcccaccctgtttgagagccactcccaaagt ctggaggccttgcaacgctggggcctgaacgtgtccagcagctggcgcaagtgcagcacc attgaggaagtgatggcctttattcatgagtgggaaaccaaacgctttgaactgcccatc gccaccgacggcattgtagtgaaggtgaactcgtacgcgcagcaggaagagctgggctat accgccaagagcccgcgctgggccatggcctataaatacaaggctatggaagccgtcacc gagctcctaggcattgaatacaatgtgggccgcaccggcgccgtgacccctgtggctctt atgaaaccggtcctgctggcgggcaccaccgtaaagcgggcctccctccacaacgccaat gagattgaacggctgggtctcatggtccatgactttgtgaccgtggagaaaggcggcgag atcatcccgaaggtaacagccgtgaaaaccgagttacggccggccaacgcggagcctatt gtctacccttccgtctgcccttcctgcggcacggccttgattcgccacgaaggtgaggcc aaccactactgccccaacgagaaaggctgtccgccgcaagtgaaaggcaagctggagcac ttcatcagccgcaaggccatgaacatcctgagcctgggcgaaggcaagattgagctgctg gtggagcaaggcctggtgaccagccccgaccatctctacgacctcacctatgatactctc ttcggtctcaaaaagaccttcgtgaacgaggaaactggcataacccgcgtagtcacgttc cagaaaaccacggtagagaatattctcaaggctctggagaaatctaaggaagcgccgttt gaccgggtcctgttcgcactgggcatccggtttgtgggcaataccgtggcgcagaagctg gcccaatacttccggaacattgacgccttacgggctgccactgaagaagaactgattgcc gtacctgagattgggggtcgcattgccgcctccgtgcgtgagtatttccaggacctgtcc aacgtgcacctgattgagcggctacgcttccacggattgcaattggatttgggcgaaatt gccatcatagaacctgcctccgacaagctggctggccttactttcgtggtctccggtgtc ttcgctggctactcccgcgaagaactccaggacaccatcattgccaacggcggaaagatt gtcagctccatctccaagaaactctcttacctggtcgccggcgaaaaaatgggccccagc aaattagaaaaagccacctcgctgggcgtgaagattgtgaccgaagacgagtttaataag atgctggcgtag

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