Ruficoccus sp. ZRK36: K0V07_11615
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Entry
K0V07_11615 CDS
T07427
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0V07_11615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rufi03400
]
K0V07_11615 (nth)
Enzymes [BR:
rufi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0V07_11615 (nth)
DNA repair and recombination proteins [BR:
rufi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0V07_11615 (nth)
Prokaryotic type
K0V07_11615 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QYY34947
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All DBs
Position
2630786..2631430
Genome browser
AA seq
214 aa
AA seq
DB search
MTKTERAAWIAEELEKRFPNPPIPLDHKDAYTLLVAVLLSAQCTDIRVNKVTPLLFARAD
NPADMAKVPVEEIQAIIRPCGLAPAKAKGISGLSKIIMEKHGGEVPQTLEELEALPGVGH
KTASVVMVQAFGVPAFPVDTHIHRLAQRWKLSSGKNVVQTERDLKRLFPASKWNDLHLQI
IYYGREVCPARGCDGKRCEFCQTLFPPRRASPAP
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaccgaacgcgccgcctggatcgccgaggagctggagaagcgcttcccgaat
cctcccatccctctcgatcataaagacgcctatacgctgctggtggctgtactgctctcg
gcccagtgtacggatatccgcgtgaacaaggtcacgccgctgcttttcgcacgtgcggat
aatcccgccgacatggcaaaggtgccggtggaggaaattcaggccatcatccgcccttgc
ggtctggcccctgccaaggccaagggcatcagcgggctttccaaaatcatcatggagaag
cacggtggagaagtcccccagactctggaggagctggaggcgctgccgggggtagggcac
aagacggcgtccgttgtcatggtgcaggctttcggtgtgccggcctttcccgtcgatacg
catatccaccgcctcgcccagcgctggaagctctccagcggtaaaaatgtggtccagacc
gagcgcgacctcaagcgccttttccccgcctcgaagtggaacgacctgcacctgcagatc
atctactacggacgcgaagtctgccccgcccgcggctgcgacggcaagcgctgcgagttc
tgccagaccctcttccctccgcgcagggcaagccctgcaccctag
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