Rugamonas sp. DEMB1: QC826_06970
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Entry
QC826_06970 CDS
T08988
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug01501
beta-Lactam resistance
rug01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QC826_06970
01503 Cationic antimicrobial peptide (CAMP) resistance
QC826_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rug03036
]
QC826_06970
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rug02000
]
QC826_06970
01504 Antimicrobial resistance genes [BR:
rug01504
]
QC826_06970
Chromosome and associated proteins [BR:
rug03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QC826_06970
Transporters [BR:
rug02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QC826_06970
Antimicrobial resistance genes [BR:
rug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QC826_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
WGG51935
LinkDB
All DBs
Position
1508472..1509758
Genome browser
AA seq
428 aa
AA seq
DB search
MEPIIPTSSRRAAGTIVLLCSAAALVAGCSKSTAEAPHAQVAEVGVFTVAPQALSLTTEL
PGRTAAFQVAEVRPQVGGLIQQRLFVEGADVKAGSALYQIDPASYQAAVNSAKAALSKAR
ANLLTSGPKVARYKELVAIDGVSRQEYEDAIAAHEQAKADVESAAAALDTAAINLRYTHV
NAPIGGRIGRSAVTPGALVTASQANALTTVQQLDPIYVDLTQSSTELLRLKKALESGQLK
QAGGQARVTLLLADGSKYAEGGKLQFSDVSVDPGTGNVTLRALFPNPKHDLLPGMFVRAV
LDSGVDAQAIAVPQQGVSRNAKGEATALVLGKDGKVEQRILVTGGTQGDKWLVQSGLAAG
DRVIVEGLQKVRPGAQASVAKPAAAAAVAAGGAAGKARPTPTAPTNSGEQQWHVFSLTAR
SSHGWSRL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaatcattcccacgtcttcccgccgcgcggcggggacaatcgtcttgctctgc
agcgccgccgccctggtcgccggctgctccaaatccacggccgaagcacctcatgcgcag
gtggcggaagtgggcgtgtttaccgtcgcgccccaggcgctcagcctgaccaccgaactg
ccgggccgcaccgccgccttccaggtggccgaagtgcgcccgcaggtcggcggcttgatc
cagcagcgcctgttcgtcgagggcgccgacgtcaaggccggcagcgcgctgtaccagatc
gacccggccagctaccaggccgccgtcaactcggccaaggcggcgctgtccaaggcgcgc
gccaacctgctcaccagcggcccgaaggtggcgcgctacaaggagctggtcgccatcgac
ggcgtcagccggcaggagtacgaggacgccatcgccgcccacgaacaggccaaggcggac
gtcgagtcggccgccgccgcgctcgacacggccgccatcaacctgcgctacacccacgtc
aacgcgccgatcggcgggcgcatcggccgctcggcggtgacgccgggcgcgctggtgacg
gccagccaggccaacgcgctcaccaccgtgcagcagctcgacccgatctacgtcgacctg
acccagtcgagcaccgagctgctgcgcctgaaaaaggcgctggagagcggccagttgaag
caggccggcggccaggcccgcgtcaccctgctgctggccgacggcagcaagtacgccgag
ggcggcaagctgcagttctccgacgtcagcgtcgatccgggcaccggcaacgtcacgctg
cgcgcgctgttcccgaaccccaagcacgatctgctgccgggcatgttcgtccgcgccgtg
ctcgacagcggcgtcgacgcgcaggccatcgccgtgccgcagcagggcgtcagccgcaac
gccaagggcgaggccaccgcgctggtgctgggcaaggacggcaaggtcgaacaacgcatc
ctggtcaccggcggcacccagggcgacaagtggctggtccagtccggcctggcggccggc
gaccgcgtcatcgtcgagggcctgcagaaggtccgtccgggcgcccaggccagcgtggcc
aagccggccgccgccgcggcggttgccgccggcggcgccgctggcaaggcccggccaacg
ccaacagcgcccactaattcaggagaacagcaatggcacgttttttcattgaccgcccga
tcttcgcatgggtggtcgcgattgtga
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