Rugamonas sp. DEMB1: QC826_24085
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Entry
QC826_24085 CDS
T08988
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug00540
Lipopolysaccharide biosynthesis
rug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QC826_24085 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rug01005
]
QC826_24085 (lpxC)
Enzymes [BR:
rug01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
QC826_24085 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rug01005
]
Lipid A
QC826_24085 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WGG49581
LinkDB
All DBs
Position
complement(5233709..5234644)
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AA seq
311 aa
AA seq
DB search
MLKQRTVKELVRTTGVGLHSGTKVELTLRPAAPDTGIVFRRVDLDPVVDFPASAAAVGDT
RMASVLVKDGARVSTVEHLMSACAGLGIDNLYIDVSAEEIPIMDGSASSFVYLLQQAGVH
EQPAAKKFIRVLKPVEIREGQGDKEKWARLTPYNGFKLDFFIEFNHPAVDGTTQRAHVDF
GDVSYVHDVARARTFGFMQDVEMLRGIGLARGGSLENAIVMDEYRILNSDGLRYEDEFVR
HKILDAIGDLYLVGHPLLASYEAHKSGHALNNQLLLELLKHPEAYEIVSFATNETAPPSY
LRQMAREWALT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaacgcaccgtcaaagaactggtccgcaccaccggcgtgggactgcactcc
ggcaccaaggtcgaactgaccctgcgtccggccgcgccggacaccggcatcgtcttccgc
cgcgtcgacctcgacccggtggtcgacttcccggccagcgcggcggccgtcggcgacacc
cgcatggcctcggtgctggtcaaggacggcgcccgcgtctccaccgtcgaacacctgatg
tcggcctgcgccggcctgggcatcgacaacctgtacatcgacgtcagcgccgaggagatc
cccatcatggacggctcggcctcgtcgttcgtgtatctgctgcagcaggccggcgtgcac
gagcagccggcggcgaagaagttcatccgcgtgctcaagccggtggagatccgcgagggc
cagggcgacaaggaaaaatgggcgcgtttgacgccctacaacggcttcaaattggacttt
ttcatcgaattcaaccatccggcggtcgacggcaccacccagcgcgcccatgtcgacttc
ggcgacgtgtcgtatgtgcacgacgtggcgcgcgcccgcaccttcggcttcatgcaggac
gtcgagatgttgcgcggcatcggcctggcgcgcggcggctcgctggagaacgccatcgtc
atggacgagtaccgcatcctcaactcggacggcctgcgctacgaggacgagttcgtccgc
cacaagatcctcgacgccatcggcgacctgtacctggtcggccatccgctgctggccagc
tacgaggcgcacaagtccggccacgccctcaacaaccagctgctgctcgagttgctgaag
catccggaggcctacgagatcgtctccttcgccaccaacgagacggcgccgccgtcgtat
ctgcgccagatggcgcgcgagtgggcgctgacttaa
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