Ruminococcus sp. SR1/5: CK1_04970
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Entry
CK1_04970 CDS
T02601
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum00290
Valine, leucine and isoleucine biosynthesis
rum00660
C5-Branched dibasic acid metabolism
rum01100
Metabolic pathways
rum01110
Biosynthesis of secondary metabolites
rum01210
2-Oxocarboxylic acid metabolism
rum01230
Biosynthesis of amino acids
Module
rum_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
CK1_04970
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
CK1_04970
Enzymes [BR:
rum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
CK1_04970
4.2.1.35 (R)-2-methylmalate dehydratase
CK1_04970
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
CBL18797
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All DBs
Position
428939..429301
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AA seq
120 aa
AA seq
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MDNDQKGTCFMDKGTIFKFHNDLDTDQIIASQYLLLPNLDEMKGHTFESLDPDFSKKVKP
GDFVVGGENFGCGSSREQAPGVLKALGVKAVIAKSFARIFSAMPLISDFRQLSVRIFRML
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggataacgatcagaaaggaacttgttttatggataagggaacaatttttaaatttcat
aatgaccttgataccgatcagatcattgcatcccagtatctgcttctgccgaatctggat
gaaatgaagggccacacatttgaatcactggatccggatttttccaaaaaggttaaaccg
ggagattttgtagttggaggagagaacttcggatgcggatcctccagagagcaggcaccg
ggtgttcttaaggcacttggagtaaaggcagttattgcgaaatcttttgcccgtattttt
tccgcaatgccattaatatcggacttccggcaattgtctgtaaggatcttccggatgctg
tga
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