Runella rosea: DR864_14145
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Entry
DR864_14145 CDS
T05537
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
run
Runella rosea
Pathway
run00300
Lysine biosynthesis
run00550
Peptidoglycan biosynthesis
run01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
run00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DR864_14145
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DR864_14145
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
run01011
]
DR864_14145
Enzymes [BR:
run01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DR864_14145
Peptidoglycan biosynthesis and degradation proteins [BR:
run01011
]
Precursor biosynthesis
Amino acid ligase
DR864_14145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxK
CbiA
YqeC
DUF6059
Motif
Other DBs
NCBI-ProteinID:
AXE18807
UniProt:
A0A344TJI6
LinkDB
All DBs
Position
complement(3402080..3403540)
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AA seq
486 aa
AA seq
DB search
MSKTLQEILAGVPVISVTGNTGIEPTGIEFDSRRVGAGSLFVAQKGTQVDGHQFIPKVIE
MGASAILCEDLPAELTDGVTYIHVADSARTMGLLAANFYDNPSAKLKLVGVTGTNGKTST
VTLLFKLFRQLGYRVGLLSTVQNQIDDDVIPSTHTTPDSVKINELLAEMVRRGCTHCFME
VSSHAVAQERIAGLLFSGGIFTNITHDHLDFHKTFDNYIKAKKGFFDQLPKHAFALVNID
DRRGGVMVQNTAARKETYSLQTIATFKGKLLADSLFGLQMEIDGKEVWFKLIGKFNAYNL
LGVYGAALLLGEDEEQVLMALSAITPPPGRFEQVVSADAIVGIVDYAHTPDALQNVLETI
NELREGDQQVITVVGCGGNRDATKRPEMARIAGELSTRVILTSDNPRNEEPMAILAQMEV
GISPVDYKKMKVIEDRRAAIRYAVSLAQPHDIILVAGKGHETYQEIKGVKHHFDDREELK
EAFDVR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagacgcttcaggaaatattggcgggtgttccagtcatttcggtgactggaaat
actggtatcgaaccaacgggtattgagtttgattcgcggcgcgtaggtgcggggtcgttg
tttgtggctcaaaaaggcacacaggtagatgggcatcagttcattccgaaagtgattgaa
atgggtgcgtcggcgattttgtgtgaagacttgcccgctgagttgaccgacggggtcacg
tacattcatgtggcagattctgcccgtacgatgggtcttttggcggctaatttttacgat
aatccttcggcaaaactcaaattggtgggcgtaacggggaccaatggcaaaacctcaact
gtgacgctattgttcaagctgtttcgtcaattgggctaccgtgtggggttactttcaacg
gtacaaaaccaaattgatgatgacgttattccatccacgcacaccactcccgactcggtc
aaaatcaatgaattactggccgaaatggtacggcgtggctgtacgcattgttttatggaa
gtgagctctcacgccgtggcgcaggagcgcattgccgggttgcttttttcgggcggtatt
tttaccaacattacccacgatcaccttgattttcataaaacgtttgataattacatcaaa
gctaaaaagggcttctttgatcaactgcccaaacacgcttttgcgctcgtcaatatcgac
gaccggcgcggcggcgtaatggtgcaaaataccgccgcccgcaaagaaacctattccctc
caaaccatcgcaactttcaagggaaagctccttgccgatagcctttttggtcttcaaatg
gaaattgatggcaaagaagtttggtttaaattgattggtaaattcaacgcttacaatctg
ttgggggtgtacggtgcggcgttgctgttgggagaggacgaagagcaggtgcttatggct
ttatcggcgattacacctccgcctggccgttttgagcaagtcgtcagcgcggatgccatc
gtaggaattgtggattatgcccacacgcccgatgcccttcaaaatgtattggaaaccatc
aatgaacttcgggaaggcgaccagcaggtgattacggtcgtgggttgcggtggaaatcgg
gatgctactaagcgtcccgaaatggcgcgtattgcgggagaattgagcacccgcgtgatt
ctaacatccgataatccgcgcaacgaagagcccatggcgattttggcgcagatggaagta
ggaatctcacccgtagattataaaaaaatgaaagtcatcgaagaccgccgcgcggccatt
cgttatgccgtgtcgttggcgcagccgcacgacatcattctagtagcaggcaagggccat
gagacttaccaagaaataaaaggagtcaaacatcactttgacgatagagaagagttgaag
gaggcgtttgacgtaagataa
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