Runella sp. SP2: DTQ70_16840
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Entry
DTQ70_16840 CDS
T05690
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rup
Runella sp. SP2
Pathway
rup01501
beta-Lactam resistance
rup01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DTQ70_16840
01503 Cationic antimicrobial peptide (CAMP) resistance
DTQ70_16840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rup03036
]
DTQ70_16840
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_16840
01504 Antimicrobial resistance genes [BR:
rup01504
]
DTQ70_16840
Chromosome and associated proteins [BR:
rup03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DTQ70_16840
Transporters [BR:
rup02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DTQ70_16840
Antimicrobial resistance genes [BR:
rup01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DTQ70_16840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
BSH_CzcB
RND-MFP_C
Biotin_lipoyl
HH_MFP_RND
BSH_CusB
YknX_C
BSH_YknX
BSH_LcnD
DUF3053
BSH_YhbJ
VopS_N
KTSC
Beta-barrel_RND_2
Csm1_N
HH_AAEA_pHBA
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
AYQ33719
LinkDB
All DBs
Position
4216993..4218114
Genome browser
AA seq
373 aa
AA seq
DB search
MRVTLIFTSVIGLCISSCSTADSNQTTTQEKYPVIQPITIDTVYHTDYVSDINSVKNVEI
RARVKGYIESIHVDEGKTVRKGQVLFRISNQEYKGDLLRATAVLKSAIAEAKTAELDLLN
VKKLVDKNVVSKTEYDMAKAKLDALNARIEEAESQEQSAKLKLSFSEIKAPFDGIINRIP
NKIGSLIDEGTLLTTISDNQEVYAYFNVSEKEYLEFAASNKQPDNRNQVSLILANSEEHP
HKGFVETIEGEFDNATGSIAFRARFPNPERILKHGSSGKVRILRKVKNALVVPQKSTFEV
QDKMYVYVVDNQNKVQMRNIVPKLRMPHLYVLESGISPSDKVIYEGLQDMRVGMSVQPEM
KSLATILPQLAQQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagagtaaccctaattttcacttcggtgattgggctgtgcatttctagctgctcgacc
gctgattctaaccaaaccactacccaagaaaagtaccctgttattcaacccattacgatt
gacaccgtctatcatacggattatgtttcggacatcaactccgttaaaaacgttgaaatt
cgtgctcgggtcaagggctacattgaaagcattcatgtcgatgaaggaaagacagtacga
aaaggtcaagtgcttttccgtatcagtaatcaagaatataaaggcgatttattacgcgct
acggccgtgctaaaaagcgccattgctgaggccaaaactgctgaacttgacctactaaac
gtcaagaaattggtggataagaacgttgtatccaaaactgaatacgacatggccaaagcc
aaactcgatgccctcaatgcccgcatcgaagaggctgaatcgcaagagcaaagcgccaaa
ctcaagctgtctttttcggaaataaaagcacctttcgacggcatcatcaaccgtattccc
aacaaaatcggaagtttgattgacgaaggaacgcttctaacgaccatctccgacaaccaa
gaagtatatgcttattttaatgtttcagaaaaagaatacctcgaatttgcggcaagtaac
aaacaacctgacaaccgtaatcaagtatcgttgattctggccaacagcgaagagcatccg
cacaaaggcttcgtcgaaaccattgagggtgagtttgataacgccacgggaagcattgcg
tttcgggcgcgttttcctaaccctgaacgtattctcaaacacggttcgagcggaaaagta
cgcatattacgcaaagtcaaaaatgcgcttgtagttccgcaaaagtcaacgtttgaggtg
caagataaaatgtacgtttatgtagtggacaaccaaaacaaagtccagatgcgaaatatc
gtgcctaaactccgaatgccgcacttgtacgtgctcgaatcggggattagtcccagcgac
aaagtcatctacgaagggttgcaagacatgcgcgtagggatgtcggtacagcctgaaatg
aagtcgttggccaccatccttccgcaattggcgcagcaatag
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