Runella sp. SP2: DTQ70_24300
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Entry
DTQ70_24300 CDS
T05690
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rup
Runella sp. SP2
Pathway
rup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DTQ70_24300 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_24300 (nth)
Enzymes [BR:
rup01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DTQ70_24300 (nth)
DNA repair and recombination proteins [BR:
rup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DTQ70_24300 (nth)
Prokaryotic type
DTQ70_24300 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
EndIII_4Fe-2S
DUF763
DUF2400
DUF6063
Motif
Other DBs
NCBI-ProteinID:
AYQ36466
UniProt:
A0A3G3GYG3
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All DBs
Position
6024829..6025488
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AA seq
219 aa
AA seq
DB search
MLKKERYRQLIEHFSQKFPQAETELHYTNPYELLVAVIMSAQCTDKRVNMVTPALFERYP
DPQALADSTSDEVFQYIRSISYPNNKAKHLVGMARMLLDKFGGEVPSSIEELQQMPGVGR
KTANVIASVIYNQPAMAVDTHVFRVSHRLGLVPKTATTPLAVEKELIKYIPDSVIPVAHH
WLILHGRYVCLARSPQCDKCDLTHLCKYFESQQKKNSPK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagaaagaacgttaccgccaattaatcgaacatttctcgcaaaaattcccgcaa
gccgaaaccgaattgcactacaccaatccctatgaattgttggtggcggttattatgtcg
gcacaatgtaccgacaagcgggtaaacatggtgacgccagcgttgtttgagcgttatcca
gatccgcaagcattggccgatagcacctctgatgaagtttttcagtacattcgaagtatt
tcgtatcccaataataaagccaaacatttggtaggaatggcgcgaatgctgttagataaa
tttggcggggaagtgcccagttcgattgaagaacttcagcaaatgccaggcgtggggcga
aagaccgccaacgtcattgcttccgtcatttataatcaaccagccatggccgttgatacg
cacgtttttcgggtatcgcaccgattgggcttggttcccaaaaccgccacaacgccgctg
gccgttgagaaagaactcatcaaatacattcctgattcggtgattcctgtggcgcaccat
tggctcattttgcacggacgctacgtgtgtcttgcccgcagcccgcagtgcgacaaatgc
gatttgacgcatttatgcaagtattttgaaagccaacagaagaaaaatagtccgaagtag
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