Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01351
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Entry
RBI_I01351 CDS
T03158
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00270
Cysteine and methionine metabolism
rus00450
Selenocompound metabolism
rus00670
One carbon pool by folate
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
rus01230
Biosynthesis of amino acids
rus04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RBI_I01351 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RBI_I01351 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RBI_I01351 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RBI_I01351 (metH)
04980 Cobalamin transport and metabolism
RBI_I01351 (metH)
Enzymes [BR:
rus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RBI_I01351 (metH)
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Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
B12-binding
B12-binding_2
CdhD
ISG65-75
Motif
Other DBs
NCBI-ProteinID:
CCO05063
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All DBs
Position
I:1506395..1508761
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AA seq
788 aa
AA seq
DB search
MDFRTLLKTKEFVILDGAMGTMLQAKGLEMGGTPEALNIDKPDWLVDIHRQYINAGSDIV
YANTFGANRHKLEKCGYTVQQAIPAAIKNARKACEGTDTLVALDIGPIGQLLEPTGTLTF
EEAYDIYKEQILAGADADLIVFETMTDLYELKAAVLAAKEHSDLPIVCTMTFEENMRTFT
GVAISSMALTLEGLGVDAIGVNCSLGPKELYPVVEELCKWTNLPVVVKPNAGLPDPVTNE
YNCSPEDFAEFAEKLIPLGVKVLGGCCGTNPEYIKKLAEMLKGKKHVSVHNDIPAACCSP
THTVVIDQPRIIGERINPTGKKRFKEALLANDIDYILGQAIEQIHAGADILDVNVGLPGI
DEKSMMVKAVKSLQGVVDVPLQVDSTIPEVLEAALRAYNGKPIVNSVNAEDSSIENVLPL
VKKYGAAVVGLTLDENGIPKSADKRFELAKKILDKALEYGIRKEDVYIDCLTLTASAEQE
NVMQTVNAVERVKNELGLKTVLGVSNISFGLPSREIVNHNFLMMALTKGLDLPIMNPNID
SMTATVRAYKLLTNIDKNSVDFISHYGGEKKTAPAATGAKAEIDLPYAIENGLKKEAADL
TAKLLQETEAMNIVNDMLIPALDKAGAEFEKGKLFLPQLIQTAGTAQACFEVIKNYILST
GEKSVSKGKIILATVKGDIHDIGKNIVKVLLENYGYDVIDLGKDVDYQTVVDCAIENDVH
LIGLSALMTTTLVSMENTVKLLRENNVDCKIIVGGAVVTADYAEQIGADYYAKDAKESVD
IARKFFGN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtggattttagaacattacttaaaacaaaagaatttgtcatacttgacggagcaatgggt
acgatgcttcaggcaaagggacttgaaatgggtggcactcctgaagcccttaacatagac
aagcctgattggctggtggacatacaccgccagtatataaacgcaggctcagacattgtt
tacgccaacactttcggtgcaaacagacacaagcttgaaaagtgcggatatactgtccag
caagctatccctgcggctataaaaaatgctagaaaagcctgtgagggtactgataccctt
gttgctcttgatatcggacctatcggacagcttctagagccaacaggaacgctcactttt
gaagaagcttacgatatttataaggagcagatacttgcaggagctgacgcagaccttatc
gtttttgaaacaatgacagatctctatgaacttaaagcggctgttcttgcggcaaaggaa
cacagcgatcttcctatagtctgcacaatgacttttgaggaaaatatgcgtacatttacg
ggcgttgccataagctccatggctttgactttggagggtctgggcgttgacgcaatcggt
gtgaactgctcattagggccaaaggagctttatcctgttgtggaggagctttgcaagtgg
acaaatctccctgttgtagtaaagcctaatgcaggacttcctgaccctgttacaaatgaa
tataactgttcccctgaagattttgcagagtttgcagaaaagcttatcccattgggagtt
aaggtgcttggaggttgctgtggaactaaccctgagtatatcaaaaagctggctgaaatg
ctcaaaggcaagaagcacgtcagcgtgcataatgatatccctgccgcttgctgttcaccg
acacatactgtagttatagaccagccaagaataatcggcgagcgtatcaatcctactggc
aagaagcgttttaaagaagcactgcttgcaaacgatatcgactatattcttggtcaggct
atcgagcagatacacgcaggtgcggatattcttgatgtaaatgttggtctgccgggaatt
gacgaaaagagtatgatggtcaaggctgtaaagtctttgcagggcgttgtcgatgtgcct
ttgcaggtggattcaactatacctgaggtgcttgaagcggctctgagggcttataatggc
aagcctatcgtcaattctgtaaacgctgaggacagctccattgaaaatgttcttcctctt
gtaaagaaatatggtgcggctgtggtaggtcttactctcgatgaaaacggcataccaaag
agtgctgacaagagatttgagcttgctaaaaagatacttgacaaggcgcttgaatacggc
attagaaaagaagatgtgtatatagattgtcttactcttaccgcttctgcggagcaggaa
aatgttatgcagacagtaaatgcagtggagcgagtaaagaacgagcttggacttaaaaca
gttctcggtgtatcgaatatcagctttggtctgcctagcagagagatagttaatcacaac
tttcttatgatggcgctcacaaagggtcttgacctgccgataatgaatcctaatattgat
tctatgacggcaactgttcgtgcctacaagcttctgacaaacattgataaaaactctgtt
gactttatttctcactacggtggcgagaaaaaaactgctcctgccgcaacaggcgcaaaa
gctgagatagacttgccgtatgctatcgaaaacggtctgaagaaagaagcagctgacctt
actgcaaagcttttgcaggaaacagaagccatgaacattgtcaacgatatgcttatcccg
gcacttgataaggctggtgcagaatttgaaaagggcaagcttttcctgccgcagcttatc
cagacagcaggcactgcacaggcttgctttgaggtaataaaaaattacattctgtcaacg
ggtgaaaaaagcgtttctaagggcaagataatccttgcaacagtaaagggcgatatccac
gatatcggcaagaacattgtaaaggtacttcttgaaaactatggttatgacgttattgac
cttggcaaggacgttgactatcagacagtagttgattgtgcaatagaaaatgacgtacat
cttatcggcctttctgcgcttatgacaacaactcttgtgagcatggaaaatacggttaag
cttcttcgtgaaaacaatgttgactgcaagataatagtaggcggtgcggtggtaacggct
gactatgcagagcagataggcgctgactattatgcaaaagacgcaaaagagtcggtagat
atcgcaagaaaatttttcggaaactga
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