Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00378
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Entry
RBI_II00378 CDS
T03158
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase domain containing protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00550
Peptidoglycan biosynthesis
rus01100
Metabolic pathways
rus01502
Vancomycin resistance
rus02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBI_II00378
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBI_II00378
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RBI_II00378
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rus01002
]
RBI_II00378
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rus01011
]
RBI_II00378
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rus01504
]
RBI_II00378
Enzymes [BR:
rus01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
RBI_II00378
Peptidases and inhibitors [BR:
rus01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RBI_II00378
Peptidoglycan biosynthesis and degradation proteins [BR:
rus01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RBI_II00378
Antimicrobial resistance genes [BR:
rus01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RBI_II00378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
fn3
DUF4992
Y_Y_Y
MtxA_IG-like
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
CCO06139
LinkDB
All DBs
Position
II:complement(433823..435583)
Genome browser
AA seq
586 aa
AA seq
DB search
MKKIINRKNAAAVACAAMMICAAGAVPDSVLSVSMPVQAAEAVEQTSLPQVTGLTSKTPD
ISSIRLSWNAVSGADGYSVGMRSKGQYPEIADVTDTTYLVTGLPAATRENFKVRAYKIVN
GQKVYGDYSVNYNSATNPRPISGLKAQTGNASVSLSWKNVGCSNYRVFMLKNGKWTQIAQ
TDTNSYTVIGLDAGSYKFKVRACKRDDKGANHYGKYSQEITAQAVMVNKVTGLTSKTPNT
SSIKLSWNAVSGADGYSVGMRSKGKYPEIADVKGTTYTVKGLPAATRENFKVRAYKIVDG
VKIYSDYCENYNSATNPRKVTGVKASDITASTLDLNWKSVGCTSYKVFIYTNGKWKNIAS
STVNSCAINGLYAKTTYRFKVRACKTDDKGSNHYGAYSEEITVKTPDHTVEVINGMSYVD
GVLLANKTYSLPASYDPKGLTKETSAAFKKMQTAAYKDGISLWVCSGYRSYYDQRYLYDM
YCNRDGKAAADKYSARPGYSDHQTGMAIDVNNASDSFGGTREAKWLANNCAKYGFIIRYP
KGKEAYTGYQYEPWHIRYVGTPLAQNITNSGLSLEEYFGITSQYKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagataataaacagaaaaaatgcagcggcagtggcttgtgccgctatgatgata
tgtgcggcaggtgctgtgcctgacagcgtgctaagtgtgagtatgcctgtgcaggcggcc
gaagctgtggagcagacaagtctgcctcaggtcacagggctgacatctaaaacgcctgat
ataagctcaataagacttagctggaacgctgtgagcggtgcggacggctattctgtggga
atgcgttcaaagggtcagtatcctgagatagcagacgttacggacactacatatcttgtt
acaggtctgcctgcggcaacgagggagaacttcaaggtaagagcctataagatagtgaac
ggtcaaaaggtctatggcgactattcagtgaactacaattccgccacaaatccacgccct
ataagcggtcttaaagctcagacgggcaatgcttccgtcagcctttcatggaaaaatgtg
ggctgttcaaactatcgtgtctttatgctgaaaaacggcaagtggacgcagatagcgcag
acggatacaaacagctacactgtcataggacttgacgcaggaagctataaatttaaagta
agagcctgcaagcgtgacgataagggtgcaaatcactacggcaaatattcgcaggagata
acggcacaggctgtcatggtgaacaaggtcactggtctgacatctaagacccctaacaca
agttctataaagcttagctggaacgctgtgagcggtgcggacggctattctgtgggaatg
cgttcaaagggtaaatatcctgagatagctgacgtgaaaggcacgacctacactgtcaag
ggtctgcctgcggcaacaagggagaatttcaaggtaagagcatataagatagtagacgga
gttaagatatacagcgactactgtgaaaactacaattccgccacaaatccaaggaaggta
acaggagtaaaagcttctgacatcaccgcttctacacttgaccttaactggaagtctgta
ggctgcacaagctacaaggtgtttatatacacaaatggcaagtggaagaacatagcttca
tctacggtaaattcctgcgcaataaacggactttacgcaaagactacatacagattcaag
gtaagagcctgcaagacggacgataaaggttcaaatcactatggagcatattccgaggag
ataaccgtcaagaccccagaccacactgtcgaggtcataaacggcatgagctatgttgac
ggagttcttttggcgaacaaaacatattccctccctgcaagctatgacccaaagggtctg
accaaagaaacatcagcggcattcaaaaagatgcagaccgctgcatataaagacggcata
agcctgtgggtatgctcaggataccgctcttattacgatcagaggtacctttatgatatg
tactgcaaccgtgacggcaaggctgcggcagacaaatactccgcaagacccggctacagc
gaccatcagacgggcatggcaatagacgtaaacaacgccagcgactcatttggcggcaca
agagaagccaagtggcttgccaacaactgtgcgaaatatggttttataattcgttatcca
aagggcaaggaggcttacaccggttatcagtacgagccttggcatataagatatgtaggc
acgcctttagcacaaaacataaccaacagcggactttctcttgaagaatacttcgggata
acttcgcaatacaaggattga
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