Ruegeria sp. THAF33: FIU92_02615
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Entry
FIU92_02615 CDS
T06269
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00270
Cysteine and methionine metabolism
rut00450
Selenocompound metabolism
rut01100
Metabolic pathways
rut01110
Biosynthesis of secondary metabolites
rut01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
FIU92_02615 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FIU92_02615 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rut01007
]
FIU92_02615 (patB)
Enzymes [BR:
rut01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
FIU92_02615 (patB)
Amino acid related enzymes [BR:
rut01007
]
Aminotransferase (transaminase)
Class II
FIU92_02615 (patB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QFT71902
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Position
complement(504924..506096)
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AA seq
390 aa
AA seq
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MTFNDLIDRRGTNSSKWDKMEMLYGVSPEDGLAMWTADSDYQTAPCVIEAVRKAADHGVF
GYSWMHPDYLASVQWWMKTRHDWEIDTDWILTTQGLGNAIALSLDVWTDPGDGIVIFTPV
YHEFAHKVNKSGRRVVECPLVRDGESYGLDLDDAQSRLDGSEKMLLWCSPQNPSGRVWTP
DELQAVAAFAERNGLILVSDEIHHDLVYPGAKFVPMDVAAPDARPWTVTLTAASKTFNIA
GQRTGNMIIPDPKLRAAMKQRLQTLDYDPGALGVAMITAAYSPEGAEWVDAQIAHLEGNR
RLFDQTITEIPGLCSMPLQATYLAWVDFSGTGMDHAEFVRRLREDARIATSSGPGFGTGG
ETFERFNLATQRARVEEACLRLKRAFGDLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaacgacctgatcgaccgccggggcaccaacagttcaaaatgggacaagatg
gagatgctgtatggcgtctcgcccgaggacggtctggccatgtggacggccgattccgat
taccagacggcaccctgcgtgatcgaggccgtgcgcaaggctgcagatcacggcgtgttc
ggctattcatggatgcacccggactatctggcctcggttcaatggtggatgaaaacccgc
catgattgggaaatcgacacggattggattctgacgacccagggcttgggcaatgcaatc
gccctgtcgctggatgtctggaccgatcccggtgatggcatcgtgatcttcacccccgtt
taccatgagtttgcccacaaggtgaacaaatcgggccgccgggtcgtggaatgccctttg
gttcgggacggggaaagttacggcctggatctggacgacgcccagtcccggttggacggg
tccgagaagatgctactgtggtgttcgccgcaaaacccgtcgggtcgtgtctggacgccc
gacgagttgcaggccgtggctgcgtttgccgaacggaacggtttaatactggtatcggac
gagattcaccacgatctggtctatcccggcgccaaatttgtgccgatggacgtggcagct
ccggatgcacgtccgtggaccgtgacgctgactgcggcgtcgaagaccttcaacatcgcc
gggcagcggaccggcaacatgatcattcccgatcccaaacttcgcgcggccatgaagcaa
cggctgcaaacattggactacgatcccggcgcgttgggcgtggcgatgatcaccgccgcg
tacagccccgaaggggccgaatgggtagatgcccagatcgcgcatctggagggaaaccgg
cgtctgttcgatcagaccatcaccgagattccggggctctgttcgatgcccttgcaggcg
acctatctggcctgggtcgatttctcgggcaccggcatggatcacgctgaatttgtccgc
cggttgcgcgaggacgcgcggatcgcgacatcgtcaggcccgggctttggcactggagga
gaaacgtttgaacggttcaacctcgccacgcaacgggcgcgggtcgaggaagcttgcctg
cggctgaaacgagccttcggggatctgcaataa
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