Ruegeria sp. THAF33: FIU92_04935
Help
Entry
FIU92_04935 CDS
T06269
Name
(GenBank) Lanthionine synthetase C-like protein
KO
K20483
class I lanthipeptide synthase [EC:
3.13.2.4
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02020
Two-component system
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIU92_04935
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_04935
Enzymes [BR:
rut01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.4 lanthipeptide synthase
FIU92_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lant_dehydr_N
Lant_dehydr_C
LANC_like
Motif
Other DBs
NCBI-ProteinID:
QFT72364
LinkDB
All DBs
Position
complement(961769..966058)
Genome browser
AA seq
1429 aa
AA seq
DB search
MSISTTRIDAAIQSIAGSIAAAPIRTDAIGLGSAVAGEALALLAADKFLKDDRVRSAASG
RLATIWACDRDLRGAPVSLFDGRAGLGLLACHALDANPHDPEAQLALDRALRSVAQRLLE
APWMGHFDHVSGLAGISVFLCEPKSRTARLGGKSLCLRLAAELWRHSARTERGLAWTEPF
SSPEDETGPRKTTRHLVNMGLAHGSPGAVLALARLGRRHAFTPRHIEDLKDAVLFLLSHR
GAFSDSGLSSCFPCMSALSHAWEVPSRLAWCYGDLGIIYTALAAARLVGMEDEIRDVASR
VLVSCVDRPFRETGINDGGLCHGDAGIVVMALAIRSLFPKADVDPLIEKHAERLLSLVER
ELSPDGLPAIGAGWKTFQSTDLLTGSSGVLLALIALRDAGYLGYLKFMGLDVEQNVHCPS
HTEPHSSRPFLGIRVCTRSPQHDLGGVTKSTRKKDLEKRASDLIRDPAFALSLFIARPGF
FSKVMRELEKGEDLSPTVLGTLYRFVYRMCFRPTPFGAFAAVGTAIPVAGKDIVTVADHH
LDMDLDCGFLSHIAAGLAETQSTRVRCNPSAWWEQDVLHWITNGDLDGPWNHEQIIAAAD
SDLAEFIFDVDSVPISDLETALKDRPFKSAVTISDLCRSEALIPQKDPILLGHDATARTL
KRLERDMTARQKRGLAALGHALDAAREIPSMIALKQLGRTADSFAPGWRGDFLHVDAHCV
GTLETPLRAVQALTDAWNILEKIGFRVPKPNRFLEFERRFLDRYGDRAVLLGQAVDAESG
LAYLGMPLRMDFVTGTESSSDAPRQNLQEFPLEPDWDARKWVLCAQDIEILHARNTDQAP
FAIQDGVLLSKVGRSSGHNPVWTAYPEGIFPGGPKAIFGRFSRRNQLIADALMQHSPKRE
EDSTIVEADILCATDPRSSNILRRASLSRYVIEILGDSGLPSEQRIPLHDLWIRHDGSRF
RLFWGSQGVEVIPQLHAAHQSPPGAPAVYLLLIDIATHMRQPSVIWSWQSQSNRNRLPRV
CAGNVVLAPQRWRLCIPTEVIRSGKAEFWLEANRQKLELPRYVAPTDEASDMATPWDLDN
PFSTANLIKTLKKGPLSICEYLPAPEDWWIDSPHGRLASELVYAPAKPVYTSFVDYDANP
TAWQPLGHGTDEAGSWLYLRLFGDAIKLEQFLKLQSNRLTLWQKRTLIENWFFVRYADPE
LELRLRIKFSNDQDRVLKNRVLVHLQKTAGGLVDRFLVDEYLPETARYGGELGLGACERI
FGADSIAALNVLDDPKIGRSRRWMASAASIDALFEDLELPTGVRLAISERCSQNYGGGPA
SRRIARRATGKEWKSACVVLSELGVGKGIHSRPSRWNARAARLYPDIGLLQREEQDGRLG
NSLADVLGSLAHMSINRILHWGTAAEEAVIHEALCRHYRTKLNHGWKSP
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcgacaacgcggattgatgcggcaatacagtccattgcagggtcgattgct
gcggccccgatcagaactgatgcaatcggactgggaagcgccgtcgccggagaggcgctg
gcattgctggcggcagacaagtttctgaaggatgatcgcgtgcgatccgccgcgtcaggt
cgccttgcgaccatctgggcttgcgaccgagacctgcgcggagcccctgtttctctgttc
gatggccgcgccggccttgggttgctggcctgtcatgctctggacgccaatccacacgat
cccgaagcgcaactggcgcttgaccgtgccctgcgttcggttgcgcaacgccttctcgaa
gccccctggatggggcacttcgatcacgtgtccggtcttgcgggtatatccgtatttctg
tgcgaaccgaaatcccggacggcccgtcttgggggaaagtcgctgtgcctgcgtttggcg
gcggagctttggaggcactcggcacgcacagaacgggggcttgcgtggacagaacctttt
tcctctccggaagacgagaccggcccccggaaaacaacgcggcacctcgtcaacatgggg
ctggcgcatggttctcccggcgccgttctggctctggcccgcctgggtcggcggcacgcg
ttcacgccgcgacacatcgaagacctcaaagacgcggtcctgtttctcctttcgcaccgg
ggcgcattttcagacagcggcctgtcatcctgctttccctgcatgtcagcgctcagtcat
gcctgggaggtaccgtcacgtcttgcatggtgttatggcgaccttggcatcatatacacc
gcgctcgcggcggcgaggctggtggggatggaggacgaaatacgcgatgtcgcatcgcgg
gttctggtatcctgcgtcgacagaccttttcgtgagacgggtatcaatgatggcgggctt
tgccatggcgatgccggaattgtcgtgatggcccttgccattcgatcgctttttcccaaa
gcagacgtcgatcctctgatcgaaaagcacgccgaacggcttttgtccctcgttgaacgg
gaattgagcccggacgggctccccgcgatcggcgcaggctggaagacgtttcaatcgaca
gatcttttgaccgggtcgagcggcgttttgttggcactgattgccctacgggacgcgggt
tacctcggatatctgaagttcatggggctggatgttgaacagaatgtccactgcccgtcc
catacggaaccgcacagctctcgtccgttcctcggaattcgtgtttgtacgcgttcaccg
cagcacgatcttggtggagtcacaaaaagcacccgaaaaaaggatctggaaaagcgtgct
tcagatttaattcgcgatccggcctttgccttgtcgctgttcattgcacgacccggtttc
ttttcgaaggtcatgcgggaactcgagaaaggcgaagacctctcccccacagtcctcggc
acattgtatcggtttgtttacagaatgtgttttcgcccgacgccgttcggcgcattcgcg
gcagtgggcacggcaatacctgttgcaggcaaggacatcgtcaccgtggcagaccaccat
ctggatatggatctggactgtgggtttttgtctcatattgccgccggactcgccgaaacg
caaagcacgagggtgcgatgcaatccatcggcctggtgggaacaggacgttctgcactgg
ataaccaacggtgatctcgacgggccctggaaccacgaacagatcattgcagcggcggat
tccgatctggcagagttcatctttgatgtcgattccgtcccgatttccgatctggaaacg
gccctcaaagaccgccctttcaaatctgccgtgacaatctcggatctctgtcggtccgag
gctctgattccacagaaagacccaatacttctggggcatgacgcaaccgccagaaccctg
aagcggctggaaagagatatgaccgcccgtcaaaagagaggcttggcggcgctcgggcat
gctcttgatgccgcgcgtgaaatcccttcgatgatcgcgttaaagcaactggggcgaaca
gctgactctttcgccccgggttggagaggtgattttctgcatgtcgatgcgcattgcgtc
ggcacgttggaaactccactgcgcgcggtgcaggcactgaccgacgcatggaacattttg
gaaaagatcggctttcgcgtgccaaagccaaaccgttttctggaatttgaacggcgtttc
cttgaccgttacggtgaccgcgccgtattgctgggtcaggccgtggatgccgaaagcggg
cttgcatatctcggcatgccgctgcgaatggatttcgttacaggtacggagtcgtcaagt
gacgcccccaggcaaaaccttcaggaatttcctctggaacccgattgggacgcgcgcaag
tgggtgctttgcgcgcaggatatcgagatcctgcatgcccgcaacacggatcaggcccct
ttcgccatccaggacggcgttcttctgagcaaggtaggacgcagctccgggcacaacccc
gtctggacggcctatcccgaaggaatttttccgggcgggcccaaggcgattttcggccgt
ttctcaaggcgaaatcagttgatcgcagacgcgttgatgcaacacagccccaagcgtgaa
gaggattcgacaattgtcgaagcagacatcctgtgcgccacggacccccggtcatcaaac
atcctcagacgcgccagcctttcccggtatgtcatcgagatcctcggcgacagcgggttg
ccgtccgaacagaggattccgcttcacgatctgtggattcgtcacgatggcagtcggttc
cggctgttctggggcagccaaggcgtcgaggtcattccacagctgcatgctgcccaccaa
agccctcccggggcgccggctgtctatcttctgctcatcgacatcgccacgcacatgcgg
caaccgtctgtgatctggtcgtggcaatcgcaaagcaatcggaaccggctgcccagggtc
tgtgctggaaatgtggtccttgcgccgcaacggtggcggctttgtatcccgacagaggtg
attagatcaggcaaagcggaattctggctggaagcaaaccgacaaaaactggaattgccg
cgatatgtggcccctacggatgaggccagcgacatggccacgccatgggatctggacaac
cccttttccactgccaacctgatcaagacgttgaaaaaagggccgctttcgatctgcgag
taccttccggcgcccgaggattggtggatcgactcgccgcatggtcgattggcctctgaa
ctggtttatgccccagcaaagcccgtttatacgtcctttgtcgattacgatgccaacccg
accgcatggcaaccgctggggcacggcactgatgaggccggatcatggttgtatctgcgg
cttttcggggatgccataaagctggaacagttcctgaaactgcaatcgaacaggttgacg
ctttggcagaaacgcaccctgatcgagaactggttcttcgtaagatatgcagacccggag
cttgaactgcgcctccgcatcaagttttcaaacgatcaggacagagttctgaagaaccgg
gtgcttgttcacttgcagaaaacggccggtggattggtggacaggtttcttgttgacgaa
tacctgcctgaaacggcgcgctacggcggagaacttgggctcggcgcctgcgagaggata
ttcggcgccgactcgatcgctgcgcttaacgtgctcgacgatccgaagatcggccgatcc
agacgttggatggcgtcagccgccagtatcgatgccctgttcgaagatttggaactgccc
acaggtgttcggctggcgatctccgagcgctgttcacaaaactacgggggcggcccggcg
tcgcgccggattgcgcgtcgtgctactggaaaggaatggaaaagtgcatgcgttgttctg
agtgaactcggtgtaggcaaaggcattcattcgcggccatcgcgctggaacgcacgtgcg
gccaggctttatccggatattggactccttcagcgagaagaacaggatggccggttggga
aacagcttggccgacgttctgggaagcctcgctcatatgtccatcaaccggatccttcac
tggggaaccgccgcggaagaggcagtcatccacgaggcgctgtgtcgacattatcgaacc
aaattgaaccacgggtggaaatcgccctag
DBGET
integrated database retrieval system
