Rhodomicrobium vannielii: Rvan_2121
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Entry
Rvan_2121 CDS
T01353
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00300
Lysine biosynthesis
rva00550
Peptidoglycan biosynthesis
rva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rvan_2121
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rvan_2121
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rva01011
]
Rvan_2121
Enzymes [BR:
rva01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Rvan_2121
Peptidoglycan biosynthesis and degradation proteins [BR:
rva01011
]
Precursor biosynthesis
Amino acid ligase
Rvan_2121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADP71346
UniProt:
E3I245
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All DBs
Position
complement(2314274..2315641)
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AA seq
455 aa
AA seq
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MLFAALSGTKADGMAYAKAAEAAGAVAVLAGETANAEGLSLPILRAAEPRRALALLAARF
YRAQPDIIAAVTGTNGKTSVAAFLRQIWATAGHDAASLGTIGIITNAGERPLSHTTPDPV
ALHKALADLANEGVTHLALEASSHGLDQHRLDGVRFSAGAFTNITRDHLDYHPTFEDYFN
AKMRLFRDLLPSGAPAIIDADGDHADDVVGTARAKKLDVMTVGERGAALCLKGVERDGFR
QRLSIIYRGRLFTVLLPLAGAFQVSNALVSAGLALGLGSSAGGVFEALETLRGAKGRLDY
VGETSAGAPIFVDYAHTPDALVKALEALRPYVTGRLHVVLGCGGDRDRGKRPEMGRAATA
NADIVYVTDDNPRSEEPAAIRAAIMAAAPGATEIDGRADAIAIAIGNLERGDLLLVAGKG
HETGQIVGTKVIPYSDHEAVAAALAAIGERRASHA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgctgcgctttcgggcacgaaggcggacggcatggcttacgcaaaggcggcg
gaagctgccggtgcggtggccgtgcttgcgggcgaaacggcaaacgccgaggggctttcc
ctgcccatcctccgcgccgccgagccgaggcgcgcgctggcgcttctcgccgcccggttc
tatcgcgcgcagcccgacatcatcgccgccgtcacgggcacgaacggcaagacgtccgta
gcggcattcctgcgccagatatgggcgacagcgggccacgacgctgcgagcctcggcacc
atcggcatcatcaccaatgcgggcgagcggcccctgtcgcatacgacgcccgatccggtc
gcgctgcataaggcgctggcggatctcgcgaacgagggcgtgacgcatctcgcgctcgaa
gcgtcgagccacggcctcgaccagcaccggctcgacggcgtgcgcttctcggcgggcgcg
ttcacgaacatcacgcgcgaccaccttgattatcacccgaccttcgaagattatttcaac
gcgaagatgcgcctgttccgcgatctcctgccctccggcgcgcccgcaatcatcgacgcg
gatggcgatcacgcggacgatgtcgtgggcacggcccgcgcaaagaagctcgacgtgatg
accgtgggcgaacgcggtgccgcgctttgcctgaagggcgtcgagcgcgacggcttccgc
cagcgactttcgatcatctatcgcgggcggctgttcaccgtgctgctgccgcttgcgggc
gcgttccaggtgtcgaatgcgctggtgtcggcggggctcgcgctcgggctcggcagttcg
gcgggaggcgtcttcgaggcgctggaaacgctacgcggcgcgaagggtcggctcgactat
gtcggcgagacgagcgcaggcgcgccgatattcgtagactatgcccacacgcccgacgcg
ctggtgaaggcgctggaagcgctccgcccttacgtgaccggtcggctgcacgtagtgctc
ggctgcggcggcgatcgcgaccggggcaagcgtcccgagatgggccgcgcggcgaccgcc
aacgccgatatcgtttatgtcacagacgacaatccgcgcagcgaggaaccggccgcgatc
cgtgccgcgatcatggcggcagcaccgggcgcgaccgagatcgacggacgcgcggatgcc
atcgccatcgccatcggcaaccttgagcggggcgatttgttgcttgtcgctggcaagggc
cacgaaacggggcagatcgtcggcaccaaggtcattccctattccgatcatgaggcggtc
gctgctgcgctcgccgccatcggagaacggagagcaagccatgcctga
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