Candidatus Rickettsiella viridis: RVIR1_11740
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Entry
RVIR1_11740 CDS
T05765
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00540
Lipopolysaccharide biosynthesis
rvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RVIR1_11740 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rvi01005
]
RVIR1_11740 (lpxC)
Enzymes [BR:
rvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RVIR1_11740 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rvi01005
]
Lipid A
RVIR1_11740 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BBB15636
UniProt:
A0A2Z5UVI4
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All DBs
Position
complement(1237454..1238461)
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AA seq
335 aa
AA seq
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MYSQRKHNSTKVSRPIKQRTANGVAAKMARALKQRTLKNVIKAAGITLHSGETAILTLRP
APINTGIVFRRIDFNPIVEVQARAEHVGDTTLQTTLVKNGVRVATIEHLMSAMAGLGIDN
AYVDITASEIPIMDGSAGPFIFLIQSAGIEEQSAAKRFIRIKRPIKVTDGDKWASFEPFD
GFKISFEIDFNHPLFQNRSQKASIDFSKTSYIKEVSRARTFGFMADYEKLREVRLALGGS
LDNAVVVDEYRVLNEDGLRYEDEFVRHKILDAVGDLYLLGYSLIGSFSGYKSGHALNNLL
LRRLLENEAAWEYVEFEDEVKAPLAYRRALLLDPT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgtacagtcaaagaaaacataattcaacaaaagtttcgcgtcctataaaacaacgcacc
gccaatggtgttgctgcgaaaatggcgcgtgctttaaaacagcgtaccttaaaaaatgtg
attaaagcggctgggattaccctacatagtggtgagacggctattttaactttacggcca
gcgcctattaataccggtatcgtttttcgtcgaattgattttaacccgattgtcgaagta
caagcgcgtgctgaacatgtaggtgataccaccttacaaacgactttagtcaaaaatggt
gttcgtgttgcaacaattgaacatctgatgtcagcgatggcagggttaggtattgataat
gcctacgttgatattactgcctcagaaatccctattatggatggcagtgcagggccgttt
atttttcttattcagtcagcaggtattgaagaacagagcgctgcaaagcggtttattcgt
attaagcgacctatcaaagtgacggatggtgataaatgggcttctttcgagccatttgat
ggtttcaaaatttctttcgaaattgattttaaccatccactttttcaaaatcgtagtcaa
aaggcaagtatcgatttttcaaagacttcttatattaaagaagtgagtcgtgcacgtact
tttggtttcatggcggattatgaaaagttacgtgaagtacgtttggctttaggcggaagc
ttagataatgctgtggtggtagatgaatatagagtactgaatgaagatggtttgcgttat
gaagatgaatttgttcggcataaaatcctcgacgcggtaggtgatttgtatttacttggc
tacagtcttattggttcttttagtggctataaatcaggccatgccttaaataacttattg
ttgcgtcgtttattagagaatgaagctgcttgggaatatgtagagtttgaggatgaagtt
aaagcacccttagcttatagacgcgccttattacttgatccaacctga
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