Rhododendron vialii: 131308922
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Entry
131308922 CDS
T09330
Name
(RefSeq) probable DNA helicase MCM9 isoform X1
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131308922
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131308922
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131308922
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
131308922
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131308922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
MCM_N
AAA_16
FtsK_SpoIIIE
AAA_22
AAA_7
Motif
Other DBs
NCBI-GeneID:
131308922
NCBI-ProteinID:
XP_058191950
LinkDB
All DBs
Position
11a:31750506..31763589
Genome browser
AA seq
668 aa
AA seq
DB search
MADVSPVRAVHKKDMANYLIKHHFDQLRSISLSPDSRLHYPLYIDFAEFFDYHPTLAKVI
FFKPIEYLHLFDESATFAQEKVIDSGSKGWNNAIVKKFVHVRINVCGSPLELQETFPSIG
RIRVKHRGKLITLKGTVIRSGAIKMIEGEVEFECRKCKLRFTVYPELETRNTPTKPSVCP
SQGDEICGGTSFLPVDGPVCHDYQEIKIQESTQVLGVGAIPRSIPVILSDDLVDIVKAGD
DVIVTGVLTAKWSSDLKDVRCDLDPVLIANHVRRVNELKSDIDIPDDVLMTFEQFWLDFK
DKPLKGRNAILRAICPQIFGLFTVKLAVALTLIGGVQHVDASGMKVRGESHFLLVGDPGT
GKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEF
DSMREHDRATIHEAMEQQTISVAKAGLVTTLSTKTIVFGATNPKGHYDPSQPLSVNTALS
GPLLSRFDIVLVLLDTKNPEWDAVVSSHILGQAEPEKGKHDEDLANVWPLPMLRRYIYFV
KRYFKPVLTKEAEKVISSYYQLQRRSATQNAARTTVRMLESLIRLAQAHARLMFRNEVTR
LDAVTAILCIESSMTTSAIVDSVGNALHSNFTENPDQEYSKQERLIIEKLSCIDDFPDIG
NLAGSLRG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcagtccagtgcgtgcggtgcacaagaaagacatggcgaattatctgata
aagcaccacttcgatcagcttcgttccatcagtctctcccctgactctcgcctccattac
cctctctacatcgattttgcagagtttttcgattaccatcccacgcttgcgaaggtcatt
ttcttcaaaccaattgaatacttacacctgttcgacgaatcagctaccttcgctcaggag
aaagtcatagattcaggttcaaaaggttggaacaatgctattgtgaagaagtttgtgcat
gttcggatcaatgtttgcggttctcctcttgaattacaggaaacttttccaagcattggg
cggattagagtgaagcatcgtgggaaacttatcactctcaaaggaactgtcatacggtct
ggagcaatcaagatgatcgaaggggaagtggaatttgagtgccggaaatgcaaactcagg
ttcacagtttatccggagttggaaacaagaaatacgccgacaaagccatcagtttgccca
tcccagggtgatgaaatttgtggaggcaccagtttcctacctgtagatggccccgtgtgc
catgattatcaggaaattaagatccaagaaagtacacaagtgttgggtgttggggcaatc
cctcgttcgattcctgtcattttgagtgatgatcttgttgacattgtcaaggctggagat
gatgttattgttactggggttttgacggccaaatggtcttcggatttgaaggatgtgcgt
tgtgaccttgatcctgtattaattgctaaccatgtgaggagagttaatgagctgaagtca
gacattgatattccagatgatgttcttatgacgttcgagcaattctggttggatttcaaa
gataaacctttgaaagggaggaatgccattctgcgagctatatgcccacaaatttttggt
ctcttcactgtaaagcttgcagtggcattaacacttattggaggtgtccaacatgttgat
gcttctgggatgaaagttcggggagagtctcatttccttctggttggcgatccaggtact
ggaaagtctcagttcttgaagtttgctgctaaattgagcaacagatcagttattactact
gggttgggaagcactagtgctggattgacagttactgcagtcaaggatggtggtgagtgg
atgttggaagctggggcccttgttttagcagatggtggtctttgttgtatagatgaattt
gacagcatgcgagaacatgacagagcaacaatacatgaagcgatggagcaacagacgata
agtgttgccaaggctggtcttgtaacaactctcagtactaagacaattgtctttggtgca
acaaatcccaaaggacattatgatcctagtcaacctctgtcggtcaacacggcactctct
ggacccttgcttagcagatttgatatagtcctagtcctactggataccaagaacccggag
tgggatgcagtggtttcgtctcacatacttggccaggctgaaccagagaaaggaaagcat
gatgaggatttagcaaatgtctggccacttccaatgcttagaaggtacatttattttgtc
aaaagatacttcaagccggttctcacaaaggaagctgaaaaagtcatttcgagctattat
caattgcaacgacgatctgcgactcaaaatgcagctaggacaaccgtgcgcatgctggaa
agtttaataagacttgctcaagcacatgcaagactaatgttcagaaatgaggtcacacga
ttggatgccgtaactgctattctatgcattgaatcatcgatgactacctcagcaatagtg
gacagcgttgggaatgcattgcattccaacttcactgaaaaccctgaccaagaatattct
aaacaggaaaggctgatcattgagaagctaagctgtattgacgatttcccggacatagga
aatctagcaggatctttaagaggatga
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