Rhododendron vialii: 131326497
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Entry
131326497 CDS
T09330
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
rvl
Rhododendron vialii
Pathway
rvl04075
Plant hormone signal transduction
rvl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131326497
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131326497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvl03000
]
131326497
Transcription factors [BR:
rvl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
131326497
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
CCDC71L
Motif
Other DBs
NCBI-GeneID:
131326497
NCBI-ProteinID:
XP_058215274
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Position
5a:25646372..25652364
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AA seq
679 aa
AA seq
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MPLSEFYAMARGKVGSVQQKTTPYSTDQSPLRDNEFVELVWDNGQIMMQGQSIRRIPIPN
NFQSQTMKLRDKDPGNVTNSKTGKFGTLESGFNNFATATPSGEMGLSQDDDTVPWWSYPF
SDSLQHDYCSELLPELSGVTVNDISAQNSFSSIDKRNSCNQTIRGTTIISGQNGFSLELV
NGSNVSSSEVGKSSRSRSGQFFPWSFQESPAPIPSLRSGVSGVISNDTRNTKHDSCGDSI
QAQLSADDLSSIKIQKQDSGLPNASSSFMNFSHFSRPAAFVRANLQNVGAMGGENKGTAP
SSSILAEPMLVDLSNGLRNEMGSYSQPNSVPPKVDAKPVVAKPLEEPHAVYQEDSDKNDK
LPNQVLGASASEGMPDGEKTRDPLVACSSVGSGNSAERASNDPTHNFKRKYRETDDSEGR
SEDVEEESTGVRKAAAVRGATGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV
DKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMVPTGMQHMHAAHMAQFSPMAVGMGL
GMGMNGGSLGWPTIQVPSMQGPHFSAPRPQPILGTTNFQGMGVSNLQVFGHPGQGLAMSS
PRAHLMPLPGGPPINLAGGLNANGTAAAVEVPNSAPTTNSKDLLGTTNSQMVHNTDASSS
MNQESSQVCELYVMKNSIS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcagagttttatgcgatggctagagggaaggttggatctgttcaacagaaa
acaaccccatattcaactgatcaatctcctctacgcgataatgagtttgttgagctagtt
tgggataatggtcagattatgatgcaaggccagtcaattagaagaatccccattccaaac
aattttcaatctcaaactatgaagcttagagacaaagatccagggaatgttaccaattcc
aagactggaaagtttgggacattggaatctggtttcaacaattttgcaacagcaacgcca
tcgggggaaatgggattaagtcaagatgatgacacggtaccttggtggagctatcccttt
tctgattctctacaacatgattactgttctgaattattgcctgaattatctggtgttacc
gtaaatgatatctctgcacaaaatagtttctcatcgatcgacaagagaaatagttgtaac
caaacaatcaggggtacaactattatatctgggcagaatggttttagtttagaactggta
aacggatccaatgtttcttcttcagaagttggcaagtcttctagatcaagaagtggccag
ttctttccatggtctttccaggaaagtcctgcaccgattccctctcttagatctggagtt
tcaggtgttattagtaatgataccaggaatacaaagcatgatagttgcggggattccatt
caggctcagctttcggcagatgatttgtctagcataaagattcagaagcaagattcagga
ctacccaacgctagctctagttttatgaacttctcgcacttctccagacctgctgcattt
gttcgagctaatctccaaaatgttggtgctatgggaggtgagaataaggggacagctcca
agtagtagcattcttgctgaacccatgcttgttgatttgagtaatggcttaagaaatgaa
atgggttcatatagccaacctaattcggtcccacccaaggtagatgcaaaacctgtggtg
gctaagccactggaggagccacatgctgtttatcaagaagattctgataagaatgataag
ttgccaaatcaagtattgggtgctagtgcatctgaaggaatgccagatggtgagaagact
agagatccactagttgcttgttcatcagtgggttctggaaatagtgcagagagagcttca
aatgatccaacacataatttcaagagaaaatatcgggagactgacgactctgaaggccgc
tctgaagacgttgaagaagaatcaactggtgtaagaaaagcagctgctgttcgaggagct
acaggttcgaaaagaagccgagcagcagaagtgcataatttatcagaaaggaggcgaaga
gatagaattaatgagaagatgcgtgccctacaagagcttatacctaactgcaacaaggtg
gacaaagcttcaatgctcgacgaagccattgaatatttgaagacactccaacttcaagtg
cagattatgtcgatgggagctgggttgtatatgccgccaatgatggttccaacagggatg
caacatatgcatgcagctcatatggcacaattttcacccatggctgttggcatgggactg
gggatgggtatgaatggtggatctctcggatggcccacgattcaggtaccctcgatgcaa
ggaccacatttctctgccccgcgtccccaacccattttggggactaccaatttccaaggg
atgggtgtatctaaccttcaagtttttgggcatcctggtcaaggacttgccatgtcatcg
ccaagggcgcacttgatgcctttgccaggagggcctcctataaatttagctgggggactg
aatgccaatgggacggctgctgctgtggaagttccaaattcggctccaacaactaactca
aaggacttgttagggaccactaactcacaaatggtgcacaatactgatgctagtagctca
atgaaccaggaatctagtcaggtttgtgagttatatgtcatgaagaattccatttcgtag
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