Rhododendron vialii: 131329824
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Entry
131329824 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131329824
KO
K12173
BRCA1-A complex subunit BRE
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131329824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131329824
03036 Chromosome and associated proteins [BR:
rvl03036
]
131329824
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131329824
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131329824
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
131329824
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
131329824
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
131329824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
131329824
NCBI-ProteinID:
XP_058219182
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Position
6a:2538738..2546073
Genome browser
AA seq
378 aa
AA seq
DB search
MAIDTVPPLIYAQLNYLLTHSPLPIKVEQMWSGSKNHSLLDRFTLLIPFCLDYIKWDVIY
NALYPLTAPDIIFGPEDESFRPFPVSGEEGDMKSPKNSLSDWNCKDPTRLLSLILELRDL
YMTYQRKRVGDVDDERVKFELSTIFPREGIEMYMTSGVEKTEEVRFAVPLLDMDINKMVT
GCPWRHQQKIFLQVIFPVGRKYMSASAAPRLKLVSSPELKALFSIEDFRLPAWLDGMCMA
EYLPILEEMLQTQIVDGVASIDVRRKFIAALAPLFGRPVEADPVFCRKATFLGSSGVFTF
LVHFSLPLQFPKQYPALMLQSSQHFNSSSAPIKSPLLTDFPWSPRWESSEMAERFFDYLV
EECLNFKKYCNESQIQQR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgatacggtccctccgctgatatacgcgcagctcaattaccttctcactcac
tctcctctccccatcaaggttgaacagatgtggtctggatctaagaaccacagcttgctt
gatcggttcaccctactcattcccttctgcctcgactacatcaaatgggatgttatatac
aatgcactttatccattaacggctccagacatcatctttggacccgaagatgagagcttt
cgtccatttcctgtgtctggtgaagaaggagatatgaagtctccaaagaacagcttgtct
gattggaattgcaaagaccctactcggctgttgtctctcattcttgaactcagggattta
tatatgacctaccagaggaagcgtgttggagatgttgatgatgagagagtgaaatttgaa
ctcagcactatttttcccagagagggaatcgaaatgtacatgacctcaggtgttgagaag
actgaagaggtaagatttgcagtgcctttactggatatggatataaataaaatggtcacc
gggtgcccctggcgacaccagcagaagatattcttacaggttatatttcctgttggcaga
aaatatatgtctgcctctgcagcgccacgattaaaattggtatcttctcctgaacttaag
gctctattctccattgaagatttcaggcttcctgcatggttggatggaatgtgcatggcc
gaatatcttcccattttagaagagatgcttcagacacagattgtagatggagttgcatct
attgatgtcagaaggaagtttattgcggcactagctcctctttttggacggccagtggaa
gctgatccagtcttttgcagaaaggcaacatttctgggttcctctggggtgtttacgttt
ttggtacatttttcccttccactccagttcccaaagcaatatccagccctgatgcttcaa
agttctcagcatttcaattcttcaagtgcacccatcaaatcacctcttttgacggatttt
ccatggagtcctagatgggaatcatcagaaatggctgagcggttctttgattatctggtg
gaagaatgtttgaacttcaaaaagtattgcaacgagagtcagattcagcaacgttag
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