Rhagoletis zephyria (snowberry fruit fly): 108364599
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Entry
108364599 CDS
T08513
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04013
MAPK signaling pathway - fly
rze04120
Ubiquitin mediated proteolysis
rze04140
Autophagy - animal
rze04144
Endocytosis
rze04214
Apoptosis - fly
rze04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108364599
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
108364599
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108364599
04140 Autophagy - animal
108364599
09143 Cell growth and death
04214 Apoptosis - fly
108364599
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108364599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108364599
04121 Ubiquitin system [BR:
rze04121
]
108364599
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108364599
Membrane trafficking [BR:
rze04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108364599
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
108364599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_3
U-box
zf-RING_5
RING_XB3-XBAT31
TRAF3_RING
zf-rbx1
zf-Nse
zf-RING_10
Prok-RING_4
zf-RING_6
XhlA
Motif
Other DBs
NCBI-GeneID:
108364599
NCBI-ProteinID:
XP_017473821
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MQNSQNSTGRQARQQQQQPYQQGHSHHHHNSAENNKSPSSIPPNSLAISKSYVPAPASST
SDDTDFHESDARYECAICIHWLNEPVITTCGHRFCKSCLTEWLNNHNQCCPLDNTKLSTE
HDIFPDNFTRREIEQLKHKCPNSPLGCAVVASPIEVDRHLPTCPYRRLENAEEKCPFASV
KCDFVGRPETNALEEHLKEDMPHHMQLMLQAFQQTAVSTWNPQKLPSAIGGKVNGVLPPP
PPQYANEADEQLIQTMYQRIVVLEQRVREQDVKLENLTKQLATRQQIDPRYSNGTIVWEI
TNFRNVVEQLRADANNLLYSRDFYTSPHGYRFCARLNIQPRHVNLLSLHVHLMQSENDFH
LDWPFKGRIKLCMIHPHDPSLSQHDTIMTKPEVMAFHKPRERISTRGFGFVEYAKIADVM
HKGFCENDKVVIKIQINIV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaactcacaaaacagcacaggtagacaagctagacaacagcaacagcagccgtat
cagcaaggacattctcatcatcaccacaactcagcagaaaataataaatcaccatcatct
ataccgcccaattcgttagcgatatccaaatcgtatgtgcccgcaccggcttccagcacc
tctgatgatactgacttccatgaatcggatgcaaggtatgaatgtgctatctgtattcac
tggctgaatgagcctgtcatcaccacttgcggtcatcggttttgcaaatcttgcctcaca
gaatggctaaacaatcacaatcagtgttgtccgttggataacacaaagctttctaccgaa
cacgatatcttcccggacaactttactagacgcgaaatcgaacaacttaagcacaagtgc
cccaattcgccactgggttgcgcagtggtagcctcaccaatagaagtggatcgtcatttg
ccaacttgtccctacaggaggctggagaacgccgaggaaaaatgcccatttgcaagtgta
aagtgcgactttgtcgggcggcccgaaacaaatgcactcgaagaacatcttaaagaggat
atgccgcaccacatgcaactaatgttgcaggcattccagcaaacagcagtttccacatgg
aatccacagaaactcccatcggctattggtggcaaggtaaatggcgtgctaccaccacct
ccaccgcaatatgcaaatgaagctgacgaacaacttatacaaacgatgtaccaacgtatt
gtggtactagagcagcgcgtaagagaacaggatgtaaagttagaaaatctcacaaagcaa
ttggccacacgtcagcaaatcgatccacgctacagcaatggaacaatcgtctgggaaata
acaaattttcgtaacgtagtggaacaactacgtgccgatgcaaataatttactttattca
cgcgatttttatacctcgccgcatggctaccgtttctgtgcacgtcttaacatacagcca
agacacgtcaatttactaagtctacatgtacatttaatgcaatcggaaaatgattttcat
ttagattggccattcaaaggacgcatcaaactatgcatgatacatcctcacgatcccagt
ctctcgcaacatgacactattatgacaaaaccagaagttatggccttccataaaccacgg
gaacgcataagcacacgtggttttggtttcgtggaatacgctaaaatagcggatgtaatg
cacaaaggcttctgtgagaatgataaagtggtcatcaaaatacaaataaatatagtttaa
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