Rhagoletis zephyria (snowberry fruit fly): 108365988
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Entry
108365988 CDS
T08513
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108365988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108365988
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108365988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_1st
Ig_NUP210_2nd
Ig_NUP210_7th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_15th
Big_2
Ig_NUP210_4th
NUP210_Ig
Glyco_hydro_114
Motif
Other DBs
NCBI-GeneID:
108365988
NCBI-ProteinID:
XP_017475724
LinkDB
All DBs
Position
Unknown
AA seq
1902 aa
AA seq
DB search
MACKICLVILSLFALCSISVALKLNYPRVLLPIFNKISVNFTLEVIEKGCFKWSSSRQDL
ILVTPLYEDVESECSYRATVTVLTREAHHNAAIVLAEDVTTGENLRCDVILDVIDKLGVH
TTTRQLFLEEAPETFELRAEDSQGNEFTTLEGIEFSWVISSLSSRGGNKNWAPALRFLTF
NESPYHVVPPALEKFEAQRLKGYMVLLEGINTGTAKVTISIPYPEYSHVPKIEVFINVLA
NIILEPSDVHLLPGDTINFRILQLKMGKLQEISLNDQYFLEIEDSKVASISGNSANALKL
GKTVVVLRDRNAPFDEENSHLDSALVKASTPSARVTVAEPVRLGLSLLPHNNWITVEGEK
HEIALDLYTRDDHKITLGSRFSMQSELDEVLFYILSKNKNGSRIYGEAMREGVSPVYGYF
KELTAQAELQIFSELLLSPNKVILPFDPNVVKTQKIQFHARGGDGSFTWHSQNQRSLHIS
QTGLVSTVIRHSESKRSQGDIFEEGAILTTHATIRVALTKNPKITRQADIYFLPPNKLEI
IKHNFETALKDYVRLHVAIYAYVNETLVPFTRCENLVFDYEFSNQIFQVDYNEPTTQMQN
NACQVVHLRSTAVGLTNLRISYKFQDKVLKDEVTLSVFEPLLVLNPTENEVILPIGSSRN
IIYANGPQKMFTLESDLTKSLAYDGAIADISELGVGTQEPMHVFNVMCRKIGKTTFTFNI
HNALLTSNFQPYISTVSTTVHCVKPRFLNLYATEQLRASCPMEVKNSLLHIKERDDKFEI
EIEVQDSKNRKLMNITSLFIDWEFTAGDERYQNDVIMHFRRTEEEMFEGVRLPSRDVLIT
TIADVAQNFRIKGVVTRYDGTVLKKHDIYAEEPNFGVKNPKTDEVLTPVIENEIRFMAVN
STLFPSDHVSIFLAKNRRERIPISQGSGFYEFELYEQNVVSVEYDAKEKELVITPLRVGH
ARLEVIDRCLMTEPAHLSISVVTIGSIRVESPDRVERTQSIEAIVKIYDSNDNLLQIDPF
NLHIYELAEEIFNADILSVTLGEQYDLESGEVKYIITGNNLGETKIVFTAGSGDLLVASE
PVNVQVFPPLRLYPRNSTLVVGSSVQIYYHGGPQPDVNIVFYVQDRKVISMESAIVTAHK
LGTTKITGKCIMTNPGNGKEVVISADTVEVHVVPFVNIQVKTPLVRIRSGAVMPAAVWGV
PDLSPMVLGTLENMRVTWTTNQQDVVDIYNVFADSGVEYDSLDLTSVRIKALNPGKVKIQ
ATVELSTGQKITNSVEVVVFKILELESPKHITMDWILVAPRSTIQLKANLDDVVYKLDSD
SSGIVKVSTDGVVRTQDTLGRDLIIAKTFEQSLPIGIEVKNIQYILTSLAYPTSRLKQTE
AKIPRGMNFVLKISLHDNLGNEFSHNIDDVNGLKYDLSRKDIVDVQIGNNLTIGINLPRE
ANNMIAISLRDTTGVKYAEDYIKLSVAESPNTFPTKTIFSVGDIICFDSPLTLSSVWSSS
DEQIIAIEKFTGVAQVLGNRLKLGEKIVVTNGDKASGSTIKYDVEVRDADVIQLLKSFDI
FSGSTYRGHLVVRNHLQVDKFTNLLARNISKCSSALERIPAVKLFKCRLTSKKSLGQQLL
EHYVVTPIFEADTGRYACQIELSSDFNEVLSLVKTNDVHFDLEAQLPNGLSDVMSLKFVP
GVRVTPETLEATELKEQDLTITGLDKVLQKVEVKASDAKYLQVIQQVKAHGSLQYKVKIL
HELPTDEQLFVHVHSPTTQQDIEIPILGANTLLQTCSTQPFSDSSSFFVKVISNIGLIVT
ALVVLAFTVWLYVFLSPQQSKTEINADVFSTSIKNKSRTASTPTTSATQGSPVGQIYPNL
SPYYGQRTSPISPSGLSSGIDTQVYGDSILMSPQQRVNRRYL
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcaaaatctgtttggtcatcctcagcttgtttgcactttgtagcatttctgtt
gcattaaaattgaactatccgcgtgtgttgctaccaatatttaacaaaatatcagtaaat
tttactttggaagtcattgaaaaaggatgttttaagtggtcatcatcccgccaagatcta
atacttgtcacaccactctatgaagatgtggaaagcgagtgctcctaccgtgcaacagtg
actgtattaacacgtgaagctcatcacaatgctgccattgtgttggccgaggacgtcact
actggtgaaaatttgcgttgcgatgttatacttgatgttattgacaaattaggtgtacat
acaacaacacgacagctctttctagaggaagcgccggagacgtttgagctgcgtgcggaa
gattcgcaaggcaatgaattcactacactagaaggtattgagtttagttgggtgatctct
tctttgagcagccgtgggggtaataaaaattgggcgccggctttacgattccttaccttc
aatgaaagtccttatcacgtggtgcctccggcattggaaaagtttgaggcacagcgatta
aaaggttatatggtgttgttagagggcatcaacacaggcactgctaaggttactattagt
attccttatcctgagtatagtcatgtgccaaaaatagaggtgtttataaacgttttggcc
aatatcatactagaaccttcagatgtgcatttgctgcctggtgatacaatcaacttccgc
atattgcaattgaaaatgggcaaactacaggaaatttctctgaatgaccaatacttctta
gaaatcgaagatagtaaagtcgcatcaataagcggtaatagcgctaacgccttaaaactt
ggtaaaaccgtggtagttttgcgcgaccgaaatgcaccgtttgacgaagaaaatagtcat
ctagatagcgcgcttgtaaaagcttcaacgcccagcgcgcgagtgaccgtggctgagcct
gtgcgtttgggtctgagcctgttgccacacaataattggattacggtagagggcgaaaag
catgaaatagcattggatttatacacacgtgatgatcacaagattacactaggctcacgt
ttctccatgcaatcggagttagatgaggtgctcttctatatactatcaaaaaacaaaaat
ggtagtcgcatatacggcgaagctatgcgggagggcgtttcaccagtttatggttatttc
aaagaactcacagcacaagctgagttgcaaatttttagtgaattgttactttccccgaac
aaagttatacttcctttcgatcctaacgttgtaaagacacaaaaaattcaatttcatgct
cggggtggtgatggatcatttacttggcactcgcaaaatcaacgaagtctacatatttca
cagactggactcgtaagcacagttatacggcattcggaaagcaagcgctctcaaggggat
atatttgaagaaggtgcaatactcaccactcatgctaccattagagtggcacttacaaag
aatcccaaaattactcgccaggcagatatatatttcttgccacctaataaattggaaatt
ataaaacataactttgaaacagctttgaaagattatgtacgtctacatgtcgcaatatat
gcctacgtcaatgaaacacttgtgccattcacacgttgcgaaaatcttgtgtttgattat
gagttttctaatcagatcttccaagtggattataatgaaccaacaactcaaatgcagaat
aatgcatgccaagtagtgcatctacgcagcactgctgtaggtcttactaatttgcgcatc
tcgtataaattccaagacaaagtgcttaaagacgaggtgacattaagcgtatttgaacca
ctgttagttctaaatcccaccgagaatgaagtgatattgcctattggttcctcgcgcaat
atcatttacgcaaatggtccacagaaaatgttcaccttggaaagcgatttaacaaaatca
ttggcatacgacggagccattgctgatatcagcgaattaggggttgggacacaggaaccc
atgcacgtcttcaatgtcatgtgtcgtaaaattggcaaaactactttcacattcaatata
cacaatgctttgttgacctccaacttccaaccctacatttccactgttagcaccacagtt
cattgcgttaaaccacgtttccttaatctttatgcaacagaacagttgcgggcctcttgc
ccaatggaggtgaagaattcattgttgcacattaaagagcgtgatgacaaatttgaaatc
gaaattgaggtacaggattcaaagaatcgcaagctgatgaatattacttcgctgtttatt
gactgggaattcactgctggcgacgagcgctatcaaaacgatgtcatcatgcactttcga
cgcactgaagaagagatgttcgagggcgtgaggttaccttcgcgtgatgtgctcataacc
accatagcagatgtggcacagaatttccgtataaagggtgtagtgacgcgctatgatgga
acggtgctgaaaaaacacgacatttacgcagaagaaccaaattttggtgtaaagaatccc
aaaaccgatgaagtgcttacccctgtcattgagaatgaaattcgttttatggctgttaat
agcacactgttccctagtgaccacgtcagcatttttttggctaaaaatcgtcgtgaacgc
ataccaatttctcagggcagtggcttctatgaattcgaattatatgaacaaaacgttgta
agtgttgaatatgatgccaaagaaaaggaattggtgatcactccgctgcgcgtgggacat
gcgcgccttgaggtcatcgatcgctgtttgatgacagagccggctcatctttcgatttca
gttgttaccatcggttctattcgtgttgagtcgcccgatcgcgttgagcgcacacaatct
attgaagctattgtgaagatctatgattccaatgataacttactacaaattgatccattc
aatctacacatctatgaattggcagaagagatttttaatgcagatatactcagtgtaacc
ttgggcgagcaatacgatttggagagcggagaagtgaagtacattataaccggcaataac
ctgggcgagacgaaaatcgtttttacagccggaagtggcgatttgctagtcgccagtgaa
cctgtaaatgtgcaggtatttccaccactacgactctatccacgcaactccacattggtt
gtaggttcaagcgtacaaatttactatcatggtggaccacagccggatgtaaacattgtc
ttttatgtgcaggatagaaaagttatctcaatggagtcagccattgttacagcacacaag
ctgggcacaactaaaataaccggtaaatgtattatgacaaatcccggaaatggcaaagaa
gtggtcatatccgctgacacagtggaagtgcatgttgtaccttttgtgaatatacaagtg
aagacacctttagtgcgcatacgtagcggtgcagtaatgccggctgctgtttggggtgtg
cctgatctctcacccatggtgttgggcacgttggagaacatgcgtgtgacttggacaaca
aatcaacaggatgtggtagacatttacaatgtatttgcggattctggtgttgaatatgac
agtctagatctcacatctgtgcgtataaaggctttaaatcccggcaaggttaaaattcaa
gccactgtggaactatcaaccggtcaaaaaataacaaactctgtcgaagttgttgtattc
aaaattttggaacttgagtcgcccaagcacatcacgatggattggattttagtcgcgccc
cgtagcactatacagctgaaagctaacttggatgatgttgtctataaattggatagcgat
agcagcggcatagtcaaggtttctactgatggtgttgtgcgcacgcaggatacgctagga
cgcgatttgattatagccaaaactttcgagcagtcacttccaattggcattgaagtgaaa
aatatacaatatattttgacatcgttagcatatcccacgtcgcgtctaaagcagacggaa
gcaaaaataccacgtggcatgaatttcgtactgaaaatttcgctgcatgataatttaggc
aatgagttttcacataatattgatgatgtaaatggactgaagtacgatttgtcgcgcaag
gatattgtggatgtgcaaattgggaataacctaacaattgggataaatctgccgcgtgaa
gcaaacaacatgattgccatcagcttaagagatacgactggagttaaatacgctgaggat
tacatcaagctgtcagtggcagaatcgccaaacaccttcccgactaagacaattttctct
gtgggcgatatcatttgcttcgattcaccgctaacattgtcgtcagtttggagcagttcg
gacgagcaaattattgcaattgaaaagtttacaggagtagcgcaagtgctgggcaatcgc
ttgaaattgggcgaaaaaattgtagttaccaacggcgataaagcaagtggcagtaccata
aaatacgatgtcgaagttcgtgatgcggatgtgattcaattattgaaatctttcgatata
tttagcggttcaacgtatcgaggacatttggttgtgcgcaatcatttgcaagtggataag
tttaccaacttgctcgccagaaatatttcgaaatgttcaagtgcccttgaacgcataccc
gcggtgaagctattcaagtgtcgcctaacatcgaagaagtccttgggccaacagctactc
gaacattatgtggtaacgcccatttttgaggccgacaccggacgctatgcgtgtcagatt
gaactgtcgtcggatttcaatgaagtgcttagccttgtgaagactaatgatgtccacttc
gatttggaggctcagctgccaaatggtttatcggatgttatgtcattgaaatttgtgccg
ggcgtgcgtgttacaccggaaacgctggaggcgactgaattgaaagaacaagatttaaca
atcaccggactggacaaagtgctgcagaaggtggaggtaaaagcatctgatgccaaatat
ttgcaagtcatacaacaagtaaaagcgcacggctccttgcaatacaaggttaagatactg
catgaactgccaacggatgagcaattatttgtgcatgtccattcaccaacaacacaacaa
gacattgagatacccatactcggcgctaatactttgctgcaaacttgctccacacaaccg
ttcagcgattcatcatcgtttttcgtgaaggttatatcgaatattggtctcatcgtcacg
gcgctggtcgtgctggcattcactgtttggctgtatgtgttcctcagcccgcaacagagc
aaaacggaaatcaacgctgacgtcttcagcacctccataaagaataagtcgcgcactgcc
agcacgccaacaacatcagcaacacaaggcagtccagtcggtcaaatctatcccaatcta
tcaccctattatggtcaacgcacgagtcccattagcccaagtggtttatcgtctggaatt
gatacacaagtttatggcgattcgatattgatgtcaccgcagcaacgcgtaaatcgtcga
tatttatag
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