Rhagoletis zephyria (snowberry fruit fly): 108369742
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Entry
108369742 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: dosage compensation regulator-like
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108369742
03012 Translation factors [BR:
rze03012
]
108369742
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108369742
5.6.2.6 RNA 3'-5' helicase
108369742
Spliceosome [BR:
rze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108369742
Translation factors [BR:
rze03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108369742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
Dicer_dimer
nSTAND3
HA2_C
HA2_N
AAA_19
DND1_DSRM
AAA_22
AAA_14
NACHT
ATPase
Motif
Other DBs
NCBI-GeneID:
108369742
NCBI-ProteinID:
XP_017480415
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MADIKSVFHEWCSKTKVDPKFEVRQTGPKHRQRFLCEVRVPNYPYVAAGNSTNKKDAERN
AARDFMSFLIRTGKVNAADIPADSGLAAIAPASSVGNDGGGDRYGSQRKFFDGGLGPQDL
GQAYRPVEREINPVDRAREQMEMKEAESVDVNAAIHGNWTIENAKAKLHQFMQMNKITAD
YKYTPVGPDHARSFMAEMHIFVRQLKRTVTARETGSNKQSASKSCALSLVRQLYHLGVIE
AFSGTLKQRKDDEDMKPYPVKISEDLIQRVNECIQDLDLPVINPFNIKPEGENAGVSLLV
PTHRDVKRQANDDGMQMQGSVIPWAPPQPNWNAWNACNIDEGYLATASLEDLCNDLEVTS
KDKKMNNTELQKFIDFRERLPIAAMRNEIMSHIHEHPVVIIRGNTGCGKTTQIAQYILED
YIASGQGAFCNIYVTQPRRISAISVAERVAAERCENLGESVGYSVRFETATPRPYGAILF
CTVGVLLRKLEGGLRGISHIIVDEIHERDVNSDFLLVILRDMVHTYPDLHIILMSATIDT
TLFSDYFGRSPVLEVPGRAFPVQQFFLEDCLEMTKFKPTPESRKKTKERDDDEKAVIAEN
GEDANDQNLNKICDPKYSQQTREAMAILSESECSFELIEALLIHIKSKNVPGAVLVFLPG
WNLIFALMKYLQNSQFGGPQYRILPCHSQIPREEQRKVFEPVPXGVTKIILSTNIAETSI
TIDDIVFVIDICKARMKMFTSHNNLTSYATVWAAKSNLEQRKGRAGRVRPGFCFTLCSRA
RFEKLEESMTPEIFRTPLHELALSIKLLRLGSIHQFLSKALEPPPLDAVIEAEVLLRDMR
CLDDNDELTPXGRILARLPIEPRLGKMLILGTVFGCGDILASMASYSSTFSEIFALDIGQ
RRLANHQKQLGGRKCSDHVAMIVATQMWEGAKHRGEEEEIRFCEWKGLQLSTMRVMSEAK
GQLLDLLQQTGFPEESMISHKVDANSDDPVLDMATALLCLGLYPNVCVHKEKRKVLTTES
KAALLHKTSVNCSNLAVTFPYPXLRFGEKIRTRAVSCKQMTMVAPLHLLLFGCRKVDYVK
DNVIRLDNWLSFEMDPQHAAMLAALKPAIENLVTIACDSPDEIMQLEEPQAKLVSVIKDV
CVMNAGDFGISRETGVLPFQSRHGGGGGGDGGPPSKRGRFEGVSGGGGGWNRGGGNWSNG
GGGGGNWGRGGFGRGGGGTNQWGRFGGGGRGRF
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggctgacataaaatctgttttccacgagtggtgttcaaagaccaaagtggatccaaaa
tttgaagttcgccagactggtccaaagcatcgccaacgatttctctgtgaagtgcgtgtg
ccaaattatccttacgtggcggccggtaattccaccaataaaaaagatgccgaacgcaat
gcagctcgtgattttatgagcttcttgatacgtaccggaaaagttaacgcggctgatata
cctgcagactctggtttagcagctattgcgccagcatctagtgtaggaaacgacggtggc
ggtgatagatatggttcgcaacgtaaattttttgatggcggcttggggccgcaggatctt
ggtcaagcttatcggccggttgagcgtgaaatcaatcccgtcgatagagcacgtgagcag
atggaaatgaaggaagctgagtcagttgatgttaatgccgcgatacatggaaactggaca
attgagaatgccaaggcaaagctacatcagtttatgcaaatgaataaaataaccgcagac
tataagtatacgccagtaggccccgatcatgccaggagtttcatggctgagatgcatatt
ttcgtacgtcaattaaagcgtacggttacagcacgtgagacggggtccaacaaacaatcg
gcaagtaaatcttgcgccttgtcgttggtgcggcaactttaccatttgggtgtaatcgaa
gcatttagtggcacactaaagcaacgaaaagacgatgaagacatgaagccatatcccgta
aaaatttcggaagatctcattcagagagttaatgaatgcatccaagatctcgatcttcca
gttattaatccatttaatataaaaccagaaggcgagaatgctggcgtaagcttacttgtg
cccactcacagagatgtgaaacgccaagcaaatgatgatggaatgcagatgcaaggttct
gttataccttgggctccaccacagccaaattggaatgcatggaatgcatgcaatatcgac
gaaggttatctggccacagcatctttggaggacctttgcaacgatctcgaagttacatct
aaagataagaaaatgaataataccgaacttcagaagtttattgacttccgtgagcgctta
ccgatcgctgcgatgcgcaatgaaataatgtcgcacatacatgagcatcctgttgttatc
atacgcggcaacactggttgcggcaaaaccacacaaattgctcaatatattctagaggat
tacattgcatcaggtcaaggcgccttttgcaatatctatgtaacccagccacgccgcata
tcagcgatttcagtggcagaacgtgttgccgccgagcggtgcgaaaatcttggcgaatct
gtcggttattctgttcgcttcgaaacggctacaccgcgcccttatggagctatactcttt
tgcactgttggtgtgcttttgcgcaaactcgaaggcggcttgcgtggcatttcgcacatt
attgtagatgaaatccacgaacgtgacgtaaatagtgatttcttgttggttattctacgt
gatatggtgcatacttaccccgatctacatattatactaatgtctgctacgattgataca
acgctattttccgattactttggtcgttctccagttttggaagtccctggacgagccttc
ccagttcaacaattctttctggaagattgcttagaaatgaccaagttcaagcccacgcct
gagtctcgtaagaaaaccaaagaacgcgatgatgacgagaaggctgtgattgctgaaaat
ggggaggatgccaatgatcagaatctgaacaaaatttgcgatccgaaatactcgcagcag
acaagagaagctatggcaatattgtccgagtctgaatgctcgtttgagcttattgaagct
ttgttgatacacattaaatcaaagaatgtaccaggcgctgtgcttgtctttttgcctggt
tggaacttgattttcgccctaatgaaatatttgcagaattcacagttcggaggaccgcag
tatcgcatcttaccatgccattcgcaaattccgcgggaggaacagagaaaagtttttgaa
ccagtaccgnatggcgtaactaagatcattttgtccactaatatcgccgaaacatctatc
accattgacgatattgtcttcgtaattgacatttgtaaagcacgtatgaagatgtttact
tcacataacaatttgactagttacgctaccgtgtgggccgcaaaatcaaacttggaacaa
cgcaaaggtcgagctggtcgcgttcgtccgggtttctgttttactctctgctcacgagct
cgtttcgagaaattagaagaaagtatgacaccggaaatatttcgcactccattgcatgaa
ttggctctttcgattaagcttttgcgcctaggctccatacatcaatttctatcaaaggca
ttggaaccaccaccactcgatgcggtaatcgaggctgaggtgcttctacgagacatgcgt
tgcttagatgataatgatgagttaacaccanctggtcgtattttagctcgattgccgatt
gaacctcgattgggtaaaatgttgatattaggaacggtattcggttgcggagatattttg
gccagcatggcatcatattcaagtactttctccgaaatattcgcattggatattggccag
cgacgtttagcaaatcatcaaaagcaattgggcggacgtaaatgttctgatcacgtcgcc
atgattgtagccacacaaatgtgggaaggtgcaaagcatcgtggggaagaagaagagata
aggttttgcgaatggaaaggtttacagttgtcaactatgcgagtgatgtccgaagcgaaa
ggacaacttctggacctattgcaacaaactgggtttccagaggagtcaatgatttcacac
aaagttgatgctaattccgatgatcctgtgctggatatggccacagctctgctctgctta
ggtctttatccaaatgtgtgcgtacacaaggagaaacgtaaagttttaactacagaatcg
aaagctgctctgctgcacaaaacctcggtgaactgtagcaatctggcggtaacattccct
tatcctnntcttcgttttggtgagaagatacgaactcgcgccgtgtcctgcaaacaaatg
acaatggtagctccactacacttactacttttcggctgtcgtaaggtggattatgttaag
gacaatgtaatacgtttggataattggcttagcttcgaaatggaccctcaacatgctgca
atgctggcggccctaaaacctgctatagaaaatttggtaactatagcatgcgatagccca
gacgaaattatgcagcttgaagagccccaagcgaagcttgtgagcgttataaaagatgtg
tgtgttatgaacgcaggcgattttggtatatcaagagagactggtgtattgccgttccaa
tcgcgtcatggtggtggtggtggcggtgacggtggcccaccaagtaaacggggacgtttt
gaaggagtaagcggcggcggtggtggctggaaccgtggtggtggaaattggagcaacggt
ggaggtggcggtggtaattggggacgtggaggctttggacgaggtggtggcggcacgaat
caatggggccgctttggtggtggtggcagaggcagattttaa
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