Sphingomonas sp. AAP5: E2E30_12695
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Entry
E2E30_12695 CDS
T10507
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
saap Sphingomonas sp. AAP5
Pathway
saap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2E30_12695 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saap03400
]
E2E30_12695 (nth)
Enzymes [BR:
saap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E2E30_12695 (nth)
DNA repair and recombination proteins [BR:
saap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2E30_12695 (nth)
Prokaryotic type
E2E30_12695 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QBM76539
UniProt:
A0A4P6X7J0
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All DBs
Position
2730408..2731070
Genome browser
AA seq
220 aa
AA seq
DB search
MKRADIVEFYARLAADNPHPETELEAGNPFQLVVAVALSAQATDVGVNKATRRLFETVTT
PQQMLDLGEDALKQHIKTIGLFNTKAKNVIALSQRLVDVYGGEVPNDRDALETLPGVGRK
TANVVLNVAFGAETFAVDTHIFRVGNRTGLARGKTPLAVELKLDKATPQPFRLHAHHWLI
LHGRYVCKARRPECWRCIVADLCAFKPKTPPPKAALPKEP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcgccgacatcgtcgagttctacgcgcggctcgccgccgacaacccgcatccc
gagaccgagctcgaggcgggcaacccgttccagctcgtcgtcgcggtcgcgctgtcggcg
caagcgaccgatgtgggggtcaacaaggcgacgcggcgactgttcgaaacggtgacgacg
ccgcagcagatgctcgatctcggcgaggatgcgctgaagcagcacatcaagacgatcggc
ctgttcaacaccaaggccaagaacgtcatcgcgctctcgcagcggctggtcgacgtctat
ggcggcgaagtgccgaacgaccgcgacgcgctcgagacgctccccggcgtggggcgcaag
accgccaatgtggtgctcaacgtcgcgttcggcgccgagactttcgcggtcgacacgcac
atcttccgcgtcggcaaccgcaccggcctggcgcgcggcaagaccccgctcgcggtcgag
ctcaagctcgacaaggcgaccccgcaaccgttccggctccacgcgcatcactggctgatc
ctgcacggtcgctatgtctgcaaggcgcggcggcccgaatgctggcgctgcatcgtcgcc
gatctctgtgcgttcaagcccaagacgccgccgcccaaggctgcgctgccgaaggagccc
tga
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