Sphingomonas abietis: PBT88_04445
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Entry
PBT88_04445 CDS
T09690
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00300
Lysine biosynthesis
sabi00550
Peptidoglycan biosynthesis
sabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBT88_04445
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBT88_04445
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
PBT88_04445
Enzymes [BR:
sabi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PBT88_04445
Peptidoglycan biosynthesis and degradation proteins [BR:
sabi01011
]
Precursor biosynthesis
Amino acid ligase
PBT88_04445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WBO23386
UniProt:
A0ABY7NSF7
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All DBs
Position
927721..929178
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AA seq
485 aa
AA seq
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MKLGALIGESAGEAAGATVTGCAIDHRKVAPGTVFGAFMGWARNGEDFIDGAVAAGAIAI
VARPEANVPAGVVHIADAEPRRAFARIAAKFYAPFPKTVVAVTGTNGKTSTVEMVRQLWH
MQGLRAASIGTLGVTTTDGEGRAQQVSTGLTTPDIVTFLSNMAGLRREGVTHAAFEASSH
GLAQFRTEGLPVKVVAFTNLSRDHLDYHGTMEAYLEAKLRLFSEVVDRDGAAVVWADDAA
SSRVIEIARERGLKLITVGGRGETLKLIERTPTQLGQTLTIEAGQDFGGKVHKVNLPLIG
AYQAANALVAAGFALATGVSLADVLGGLSRLQPVRGRLERAVITAKGAPVYVDYAHTPDG
LQAAIEALKPHAQERLIVVFGAGGDRDAGKRPEMGAIAAKLADIAIVTDDNPRTEDPATI
RAAIMAAAPGATEIGDRRAAIAAAIAQAGEGDVVLVAGKGHEIGQIVGDMLLPFDDVQVA
REVAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgggtgctttgatcggcgaaagcgcgggcgaggcggctggcgcaacggtgacg
ggctgtgcgatcgaccatcgcaaggtcgcgcccggcacggtcttcggcgccttcatggga
tgggcgcgcaacggcgaggatttcatcgacggcgcggtggcggcgggggcgatcgcgatc
gtcgcccgacccgaagcgaatgtgccggcgggcgtggtccatatcgccgatgccgaaccc
cgccgggccttcgcgcggatcgcggcgaaattctacgcgcccttcccgaagacggtggtg
gccgtcaccggcaccaacggcaagacctcgacggtggagatggtgcgccagctctggcac
atgcagggcctgcgcgcggcgtcgatcggcacgctgggcgtcaccacgacggatggcgag
ggccgcgcccagcaggtgtcgaccgggctgaccacccccgatatcgtgaccttcctgtcc
aacatggcgggcctgcgcagggaaggcgtcacccacgccgccttcgaggcgtccagccac
ggcctcgcccagttccgcaccgaggggctgccggtcaaggtcgtcgccttcaccaatctc
agccgcgaccatctcgattaccacggcacgatggaggcctatctcgaggccaagctgcgg
ctgttcagcgaagtggtcgaccgagacggcgcggcggtggtgtgggcggacgacgcggcc
tcgtcgcgggtgatcgagattgcgcgcgaacgggggctgaagctgatcaccgtgggcggc
cggggcgagacgctcaagctgatcgagcgcacgccgacccagctcggccagacgctgacg
atcgaggccgggcaggatttcgggggcaaggtccacaaggtcaacctgccgctgatcggt
gcctatcaggccgccaacgcgctggtcgcggccggcttcgcgctggcgacgggcgtcagc
ctcgccgatgtgctgggtggcctgtcgcggctccagccggtgcgtggacggctggagcgg
gcggtgatcaccgccaagggggcgccggtctatgtcgactatgcgcacacgcccgatggc
ctccaggcggcgatcgaggcgctgaaaccccatgcgcaagagcggctgatcgtcgtgttc
ggcgccggtggcgatcgggatgccggcaagcggcccgaaatgggcgcgatcgcggccaag
ctggccgacatcgcgatcgtcaccgacgacaatccccgcaccgaggatccggcgacgatc
cgcgccgcgatcatggccgccgcaccgggcgccaccgagattggcgatcgccgtgccgcg
atcgccgccgccatcgcgcaggcaggcgagggcgacgtcgtgctggtcgcaggcaagggc
cacgagatcggccagatcgtcggcgacatgctgcttccgttcgacgacgtgcaggtggcg
cgcgaggtggcggcatga
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