Sphingomonas abietis: PBT88_16110
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Entry
PBT88_16110 CDS
T09690
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sabi
Sphingomonas abietis
Pathway
sabi01501
beta-Lactam resistance
sabi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBT88_16110
01503 Cationic antimicrobial peptide (CAMP) resistance
PBT88_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sabi03036
]
PBT88_16110
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sabi02000
]
PBT88_16110
01504 Antimicrobial resistance genes [BR:
sabi01504
]
PBT88_16110
Chromosome and associated proteins [BR:
sabi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PBT88_16110
Transporters [BR:
sabi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PBT88_16110
Antimicrobial resistance genes [BR:
sabi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBT88_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
WBO21681
LinkDB
All DBs
Position
3404295..3405506
Genome browser
AA seq
403 aa
AA seq
DB search
MNMSPVFRCTLFTAPLLALAACEAKPDKPAPPTPTVGIIVARPGMAAMNTELPGRTDAYQ
VSDVRPQVNGIVLKRLFTEGGIVHQGQPLYVIDPSLYRAAVGQAQGQLASAEANAVAAKL
KAQRYTELEKINAVARQDAADARATAGQADAAIVEQRAALQTAQINLRYTRVNAPITGRI
SRSSVTAGALVSASQTDALATITQLDPIYVDIQQSSTDLLALRKAIANGGAMPDTAAVKL
KLEDGTDYPQAGTLLFSEVQVDPSTGAVTLRARFPNPQGLLLPGMYVRATVSQAVRQNAF
LLPEAAVTHDPKGAASVLVVGADNKVVKKPVQDRGLSNNRWVVIAGIAAGDRIVVEGSGK
AKPGQQVRAVAASDDPATIDAAPGGGGGGGGRSASGGASGTGQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtccccggttttccgctgcacgctcttcaccgctccgttgctggcgctcgca
gcctgcgaagcgaagccggacaagccagcgccaccgacgccgaccgtcggcatcatcgtc
gcccggcccggcatggcggcgatgaacaccgaactgcccggccgcaccgatgcctatcag
gtctcggacgtgcgcccgcaggtcaatggcatcgtcctcaagcggctcttcaccgagggc
ggcatcgttcatcagggccagccgctctatgtgatcgatccctcgctatatcgcgcggcg
gtcggccaggcgcagggccagctcgcctcggccgaagccaatgcggtcgccgctaagctc
aaggcccagcgctacaccgagctcgagaagatcaacgccgtcgcccggcaggatgccgcc
gacgcgcgcgcgaccgccggccaggccgacgccgcgatcgtcgagcagcgcgccgcgctc
cagaccgcccagatcaacctgcgctatacgcgcgtcaacgcgccgatcaccggccgcatc
agccggtcctcggtgacggccggcgccctggtcagcgccagccagaccgacgcgctcgcc
accatcacccagctcgatccgatctatgtcgacatccagcaaagctcgaccgacctgctc
gcgctgcgcaaggcgatcgccaatggcggcgcgatgcccgacaccgcggcggtgaaactc
aagctcgaggacggcaccgactatccgcaggccggcaccttgctcttctccgaagtgcag
gtcgatccctccaccggcgcggtgacgctgcgcgcgcgcttccccaatccgcagggcctg
ctgctgcccggcatgtatgtccgcgcgacggtgagccaggcggtgcgccagaacgccttc
ctgctgcccgaggcggcggtgacgcacgatcccaagggcgcggcctcggtgctcgtcgtc
ggagcggacaataaggtggtgaagaagccggtgcaggatcgcgggctcagcaacaatcgc
tgggtggtgatcgcaggcatcgccgccggcgaccggatcgtggtcgagggcagcggcaag
gccaagcccggccagcaggtccgcgcggtcgccgccagcgacgatcccgcgacgatcgac
gcggcgcccggcggcggcggcggcggtggtggcaggtcggcttccggcggggcatcgggc
accggccagtga
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