Sphingomonas abietis: PBT88_17765
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Entry
PBT88_17765 CDS
T09690
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00020
Citrate cycle (TCA cycle)
sabi00785
Lipoic acid metabolism
sabi01100
Metabolic pathways
sabi01110
Biosynthesis of secondary metabolites
sabi01120
Microbial metabolism in diverse environments
sabi01200
Carbon metabolism
sabi01210
2-Oxocarboxylic acid metabolism
Module
sabi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sabi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PBT88_17765
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PBT88_17765
Enzymes [BR:
sabi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PBT88_17765
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GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
WBO21984
LinkDB
All DBs
Position
complement(3801043..3803547)
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AA seq
834 aa
AA seq
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MEATLDPLNLVARGASLEIAQAESRSEGETIEIDVAGGKQERPGAEAIALLRRIYCGNAA
LEADHIVNGDDRRWLYEQFEREMLAEPDETLYRETLEAVLLADEFERFIKTKWPTKKRFG
SEGSEASMVILREALAQAAGAGLKEVVIGGMHRGRLATLATVLGKSLPTLIAEIKGVDVG
GGSADFTGDVPYHNGLASTIDTRHGALDIRLLPHPSHLSVVAPIALGAARARLEMRQAQG
QPQAVMPLLMHTDAAFAGQGVISELLQLGGLAGYTGAGAIHLVVNNQIGFTTLPGEGRST
PYPTDIGKAYGLPVFHVNGDDPMAASAIARLAFAWRQHTGRDALINLVCYRRHGHNELDE
PRFTQPRIWAAVDAHPTLPKRYAETVAGIAPAAAASAEARRAVFAKQMAEAFENYGHTRS
NSATDQMQAFPRAAREGGDPSGQTGVPADRLIELAQRMTTLPDGFEPDPKVATFLKNRLE
SVQADTGINMATAEALAFGSLLAEGTSVRLSGQDCVRGTFTQRHLAIHDRRNGASSIPLA
QTASASATFDAINSPLTEYGILAFEYGMSLADPDKLIVWEAQFGDFVNGAQIAVDQYIVS
AEAKWRMQSSLVIALPHGLEGQGPDHSSAKIERLLQSCAGQNIIVANPSTPANLFHLLRR
QQRGAAPKPLFLIAPKSLLRDKRCQSVLADLQEGTSFQPVIPRIPGKSLKRLILCSGKIF
YALDDALKRDGLSDIGLVRIEQLYPFPQDTVVALLKAHAKAELVWCQEEPRNQGAYAFVA
DQLHQAIPAAKFRFVGRPAMAAAAGGSIDRHDGEQEIIVSAAVHGVEKAAIAAE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
gtggaggcgacgctcgatcctctcaatctcgtcgctcgcggggcctcgctggagatcgcc
caggccgaaagccgcagcgaaggcgagaccatcgaaatcgatgtcgcgggcggcaagcag
gaacgacccggtgcagaggcgatcgccctcctcaggcgaatctattgtggcaatgcggcg
ctggaggccgatcatatcgtcaatggcgacgatcgccggtggctgtacgagcagttcgag
cgcgaaatgctcgcggagccggacgagacgctctaccgcgaaacgctggaggcggtcctt
ctcgccgacgagttcgagcgcttcatcaagaccaaatggccgaccaagaagcggttcggc
agcgagggctccgaggcctctatggtcatcctgcgcgaggcgctcgcgcaggcggcgggc
gccggcctgaaggaggtggtcatcggtggcatgcaccgcggccgtctcgcgacgcttgcg
accgtgctcggcaagtctctcccgacgctcatcgccgagatcaagggcgtggatgtcggt
ggcgggtcggcggattttaccggcgacgtcccctaccataacggtctcgcatcgacgatc
gacacccgccacggcgcgctcgatatccgcctccttcctcatccgtctcacctgtccgtg
gtcgcgccgatcgcgctgggcgccgcgcgcgcgcgcctggaaatgcgccaggcccagggg
cagccgcaggccgtgatgccgctcctgatgcacacggacgccgcctttgcggggcagggc
gttatcagcgagctgctccagcttggcggcctcgcggggtacacgggggccggcgccatc
cacctcgtggtcaacaaccagatcgggttcacgacattgccgggggaggggcgttcaacg
ccgtacccgaccgatatcggcaaggcctatggtctgcccgttttccatgtgaacggcgat
gatccgatggcagcctcggcgatcgcccggctggcgttcgcatggcgccagcatacgggc
cgcgacgcgctcatcaatctggtctgctatcgacgccacgggcataatgagctcgacgag
ccgcgtttcacccaaccgcgaatctgggctgcggtcgacgcccatccgaccctccccaaa
cgctatgccgagacggtggccggcatagcgccggcggccgccgcgtcggccgaagcgcgt
cgcgccgtgttcgcaaagcaaatggcggaggccttcgagaattatggtcatacgcggtcg
aactccgcgacggaccagatgcaggcctttccgcgcgcagccagggagggaggcgacccg
tccggccaaacgggggttccggccgatcggctgatcgaattggcccaacggatgacgacg
ctgccggacggatttgaacccgatccgaaggtcgcgaccttcctgaagaaccggctcgaa
tccgtccaggccgataccggcatcaacatggcgacggcagaggcgctggcctttggcagc
cttctcgccgagggcacatcggttcggctgagcgggcaggactgcgttcgcgggacattc
acccagcgccatcttgccattcatgatcgcaggaacggtgcgagcagcattcccctggca
cagacggcgtctgcttcggcgacattcgatgcgatcaactcaccgctgaccgaatatggc
attctggcgttcgaatatgggatgagcctggcggatccggacaagctgatcgtctgggag
gcgcagttcggcgacttcgtcaacggcgcccagatcgccgtcgatcaatatatcgtgtca
gccgaagccaaatggcgcatgcaatcgtcgctcgtgatcgccctgccgcatggtctggaa
gggcaggggccggaccactcctccgcaaagatcgagcggctgctgcaatcctgcgctggc
cagaacatcatcgtcgccaacccttcgactccggctaatcttttccatctcctgcgccgc
cagcaaagaggcgccgcacccaagccgctgttcctgatcgcgcccaaatcgctcctgcgc
gacaaacgctgccagtcggtgctggcggacctgcaagagggaacgtccttccagcccgtg
atccccaggatccccggcaaatcgctcaagcggttgatcctgtgttccgggaagatcttc
tatgcgctcgacgatgccctgaagcgcgatggcctttcggatatcgggctcgttcggatc
gagcagctttatcctttcccgcaggacaccgtggtcgcgctgctgaaagcccacgcaaag
gcagagcttgtctggtgtcaggaagagccgcgcaaccagggcgcctacgccttcgtcgcg
gatcagctgcaccaggcaatccctgccgccaagttcagattcgtcgggcgtccggcgatg
gcagccgccgctggtgggtcgatcgaccgccacgatggcgagcaggagatcatcgtgtcg
gcggccgttcacggcgtggagaaggctgccatcgccgccgaatag
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