Sporomusa acidovorans: SPACI_025170
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Entry
SPACI_025170 CDS
T10566
Symbol
dmdB_1
Name
(GenBank) 2,3-dimethylmalate dehydratase small subunit
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
sacv Sporomusa acidovorans
Pathway
sacv00300
Lysine biosynthesis
sacv00680
Methane metabolism
sacv01100
Metabolic pathways
sacv01110
Biosynthesis of secondary metabolites
sacv01120
Microbial metabolism in diverse environments
sacv01210
2-Oxocarboxylic acid metabolism
sacv01230
Biosynthesis of amino acids
sacv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sacv00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SPACI_025170 (dmdB_1)
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPACI_025170 (dmdB_1)
Enzymes [BR:
sacv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
SPACI_025170 (dmdB_1)
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Motif
Pfam:
Aconitase_C
DNA_ligase_OB
Motif
Other DBs
NCBI-ProteinID:
XFO72465
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All DBs
Position
2652820..2653332
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AA seq
170 aa
AA seq
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MDGKLTVCGRVWCLGDNIDTDQILPGYAMAYPQEQLKFHALAGSAIPDFASRVNAGDIII
AGNNFGAGSSREQAPVALQAAGVGAIIARSFARIFRRNSINIGLPIMAADIIGKVKNGDE
IIVDLAAGEVTLPDKTVIRGQRPGDNVLAILQAGGLIPKVRQQLQQEREE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaagctgactgtttgcgggcgcgtatggtgcttgggggataacattgatact
gaccagatactgcctggttatgctatggcttatccgcaagaacaacttaagtttcacgct
cttgccggcagtgctattcccgattttgccagccgagtaaacgccggtgacattattatt
gccggaaacaactttggggcgggttccagccgtgaacaggcaccggtggcactgcaagcg
gcaggggtcggggcgattatcgcccggtcatttgccaggatttttcgccgcaattcaata
aatataggactcccaatcatggctgctgacattatcggcaaggtaaagaatggtgacgaa
attattgtagatcttgcggccggtgaagttaccttgcctgataaaaccgttatcagggga
cagcgtccgggtgataatgtgctggctatcttacaggccggggggctgataccgaaggtt
agacagcaattgcaacaagaacgggaggagtag
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