Saccharothrix sp. 6-C: IOD16_21965
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Entry
IOD16_21965 CDS
T09941
Name
(GenBank) HAMP domain-containing histidine kinase
KO
K18351
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx01502
Vancomycin resistance
sacx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IOD16_21965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IOD16_21965
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sacx01001
]
IOD16_21965
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sacx02022
]
IOD16_21965
01504 Antimicrobial resistance genes [BR:
sacx01504
]
IOD16_21965
Enzymes [BR:
sacx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
IOD16_21965
Protein kinases [BR:
sacx01001
]
Histidine kinases
OmpR family
IOD16_21965
Two-component system [BR:
sacx02022
]
OmpR family
VanS-VanR (actinomycete type vancomycin resistance)
IOD16_21965
Antimicrobial resistance genes [BR:
sacx01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
IOD16_21965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
DUF3730
PilJ
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
QQQ73907
LinkDB
All DBs
Position
5277316..5278443
Genome browser
AA seq
375 aa
AA seq
DB search
MGRQPGLSVRLKLTLSYAGFLMLAGGLLLTVVWVFLLRYVPEVIAPDLPGRWPPGPSVPD
RTALERAFVPKAAVVMVVLLVFGLLGGWLLAGSMLAPLTRITHATRLAANGSLSHRIGLE
GRHDEFRELADAFDTMLARIEAHDAEQQRFAANASHELRTPLAITQTLLDVARNDPDRDA
GELVDRLRFVNTRAIDLTEALLLLSRANQRSFTREHVDLSLIAEEAAETLLPLAEKRGLT
IETSGDLTPTAGSHALLLQMTTNLVHNAIVHNLPEGGTVRVTTGAHPAKAVLTVENTGEK
LTPQVVSTFTEPFQRGTQRVRSDHAGVGLGLAIVRSIAQAHGGTLTLTPRAGGGLRITVR
LPLSPPPTDRWTGDR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaggcagcccgggttgagcgtccgcctcaagctcaccctcagctacgccgggttc
ctcatgctcgccggcggcctgctgctcaccgtcgtgtgggtgttcctgctgcgctacgtg
cccgaggtcatcgcccccgacctgccggggaggtggccgcccggcccgtcggtgcccgac
cgcaccgccctggagcgcgccttcgtgccgaaggcggccgtggtgatggtggtgctgctg
gtgttcggcctgctgggcgggtggctgctggccggcagcatgctcgcgcccctgacccgc
atcacccacgccacccgcctggccgcgaacggctcgctctcccaccggatcgggctggag
ggccgccacgacgagttccgcgagctcgccgacgccttcgacaccatgctcgcgcggatc
gaggcgcacgacgccgagcagcagcggttcgccgccaacgcgtcgcacgagctgcgcacc
ccgctggcgatcacccagacgctcctcgacgtcgcccgcaacgacccggaccgcgacgcg
ggcgaactcgtcgaccgcctccgcttcgtgaacacccgggcgatcgacctcaccgaggcg
ctgctcctgctcagccgcgccaaccagcggtccttcacccgggagcacgtcgacctgtcc
ctgatagcggaggaagccgccgagacgctcctgcccctcgcggagaagcggggcctcacc
atcgagacctccggcgacctgacgcccaccgccggctcgcacgcgctcctgctgcagatg
acgacgaacctcgtgcacaacgcgatcgtccacaacctgccggaagggggcaccgtgcgg
gtcacgaccggcgcccaccccgcgaaggcggtgctcacggtcgagaacaccggcgagaag
ctcacgccgcaggtggtctcgacgttcaccgaaccgttccagcgcggcacccagcgcgtg
cgcagcgaccacgcgggcgtcgggctcggcctggcgatcgtccggagcatcgcccaggcc
cacggcggaacgctcaccctcaccccgcgagccggcggagggctccgcatcacggtccgg
ctgcccctctcgccaccgcccaccgaccggtggaccggtgaccggtga
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