Saccharothrix sp. 6-C: IOD16_38105
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Entry
IOD16_38105 CDS
T09941
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IOD16_38105 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_38105 (nth)
Enzymes [BR:
sacx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IOD16_38105 (nth)
DNA repair and recombination proteins [BR:
sacx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IOD16_38105 (nth)
Prokaryotic type
IOD16_38105 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF3553
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QQQ76721
LinkDB
All DBs
Position
8720243..8721010
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AA seq
255 aa
AA seq
DB search
MAKSAVKQPETRLGLVRRARRMVRVLGQGYPDAHCELDFTEPLELLVAVVLSAQTTDVRV
NLVTPALFKRYRTAADYASADRAELEELIKSTGFYRNKATSLIGLGSALVERFGGEVPGR
LADLVTLPGVGRKTANVVLGDAFGVPGITVDTHFGRLVRRWGWTEEEDPVKVEHAIGALV
ERKEWTLLSHRTIFHGRRVCHARTPACGACLLAPQCPSYGIGQVDPVKAQKLVKGEEAPH
LIDLAERVRAGEKPA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagcgcggtgaagcagccggagacgcggctggggctggtccgccgggcgcgc
cgcatggtgcgggtcctcggccagggctaccccgacgcgcactgcgagctggacttcacc
gagccgctggaactgctggtggccgtcgtgctctcggcgcagacgacggacgtgcgcgtg
aacctcgtcacgcccgcgttgttcaagcgctaccgcacggccgccgactacgcctccgcc
gaccgcgccgagctcgaagagctgatcaagtcgaccgggttctaccgcaacaaggcgacg
tccctgatcggcctcggttccgcgttggtcgagcggttcggcggcgaggtgcccggccgg
ttggcggacctggtgacgttgcccggggtgggccgcaagaccgcgaacgtggtgctgggc
gacgctttcggtgtgccggggatcaccgtcgacacccacttcggccggctcgtgcgccgc
tggggctggaccgaggaggaggacccggtcaaggtcgagcacgcgatcggcgcgctggtc
gagcgcaaggagtggaccttgctctcgcaccgcacgatcttccacggccgccgcgtctgc
cacgcccgcacacccgcgtgcggcgcgtgcctgctggcgccgcagtgcccgtcctacggc
atcggccaggtcgacccggtcaaggcgcagaagctggtcaagggtgaggaagcgccgcac
ctgatcgacctcgccgaacgcgtgcgagcgggggagaagccggcgtga
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