Shewanella aegiceratis: K0H80_05875
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Entry
K0H80_05875 CDS
T09153
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saeg
Shewanella aegiceratis
Pathway
saeg01501
beta-Lactam resistance
saeg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H80_05875
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H80_05875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saeg03036
]
K0H80_05875
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saeg02000
]
K0H80_05875
01504 Antimicrobial resistance genes [BR:
saeg01504
]
K0H80_05875
Chromosome and associated proteins [BR:
saeg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0H80_05875
Transporters [BR:
saeg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0H80_05875
Antimicrobial resistance genes [BR:
saeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0H80_05875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
RND-MFP_C
BSH_RND
HH_MFP_RND
BSH_CzcB
Biotin_lipoyl
BSH_LcnD
BSH_CusB
HH_YBHG
Beta-barrel_RND
CzcB_C
BSH_YhbJ
BSH_YknX
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QYJ83552
LinkDB
All DBs
Position
1327924..1329150
Genome browser
AA seq
408 aa
AA seq
DB search
MDKKYLYIPLGVLALAALLNFVVAANQAKNQSSTTQPQVVNGKATNANTAYVKAGARAVP
IASARVEAHEVAQHLSLVGKLAANRSVQIAAEVSGKVQAINLSDNQAVSQGQVLVHLEDA
KAKANLAEAKAYLNDEQRKLGEYKRLIKQHAITQTEIDAQLASVDIAEARLQAAQADLDY
HSLKAPFDGVIGLVDFSLGKLVSVGSELVSLDDLSSMRLDLQIPERYLSQIYLGMPVVAS
SSAWPGAQFHGQVVAMAPRINPETLNLKVRVNFDNPSLQLRPGMLISARLNFAPVTQAVV
PVQALEYSGTKRFVYVIDGDNIARRTQVTLGARIDDQVLIDDGLFLGDRIVVKGLVNMRD
GIKVEDVEAGQLAEGAGGRRLTQTQIQAQTQTQTQVQTGETDTARGQS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatacctgtacattccccttggcgtgctggcgctagccgccttgctcaac
tttgtcgttgctgccaatcaggccaagaatcagtcgtcaacaactcagccccaagttgta
aatggcaaagctactaatgctaacacagcttatgtcaaagctggggccagagccgtaccg
attgccagtgcccgggtcgaggcccatgaagtggctcagcatctctcattggtgggcaag
cttgccgccaatcgctcggtgcagatagctgccgaggtatcgggtaaggtgcaggcgatc
aacttaagcgacaatcaggctgtgtctcaggggcaggtattggtgcatctcgaagatgcc
aaggccaaggcaaatcttgcagaggccaaggcctatctgaacgatgagcagcgcaagtta
ggcgagtacaagcgactgataaaacagcacgccattacccagacagagatagatgctcag
ctggccagcgtcgatatcgccgaggccaggctccaggccgctcaggcggatctggattat
cacagcctcaaggcccctttcgacggcgtgatcgggctggtggactttagtctgggcaaa
ctggtgagtgtgggcagcgaactggttagcctagacgatctctccagcatgcgtctggat
ctgcagatccccgagcgttatctgtcgcagatctacctaggcatgccagtggtggccagc
agcagcgcctggcccggtgcccagtttcatggtcaggtggtggccatggcgccgcggatc
aaccccgagacccttaatcttaaggtgagggtgaatttcgacaatcccagccttcagctc
aggcccggtatgttgatctcggcgcggcttaattttgcccctgtgactcaggcggtagtg
ccggtgcaggcgctggaatactcaggcaccaaacgtttcgtctatgtgatcgatggcgac
aatattgcccgccgcactcaggtgaccctgggggcgcgtatcgacgatcaggtgctgatc
gatgatggcttattcttgggcgacagaatcgtggtcaaggggctggtcaacatgcgtgat
ggcatcaaggtggaagatgttgaagccggccagctcgccgagggggcgggaggcaggcgt
ttgactcagacccagattcaggctcagacccagactcagactcaggttcagacaggtgag
actgacaccgcacgggggcagagctaa
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