Shewanella aegiceratis: K0H80_08390
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Entry
K0H80_08390 CDS
T09153
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
saeg
Shewanella aegiceratis
Pathway
saeg01501
beta-Lactam resistance
saeg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H80_08390
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H80_08390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saeg02000
]
K0H80_08390
01504 Antimicrobial resistance genes [BR:
saeg01504
]
K0H80_08390
Transporters [BR:
saeg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0H80_08390
Antimicrobial resistance genes [BR:
saeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0H80_08390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYJ83989
LinkDB
All DBs
Position
complement(1862221..1865469)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSIINTSVKRPVSVWMFMLAVILFGMVGFSRLAVKLLPDLSYPTITIRTQYEGAAPVEVE
QLVSKPIEEAAGIVKGLRKISSISRSGMSDVVLEFEWGTDMDMASLEVREKLDTIELPLD
VKKPLLLRFNPNLDPIVRLALSLPDADAQSLKQMRTFAEEELKRQLESLSGVAAVRLSGG
LEQEVHIQLNQEKLTQLNLNADKIRERIAAENINLSAGKVVQGEKEYLVRTLNQFNSLDE
LGQIIVYRDNQTLVRLFEVADIIDSHKERNDITRIGSAESIELAIYKEGDANTVAVARKV
TAKLNDLKKLNEKAELKVIYDQSEFIESAVSEVTSAALIGSLLSMLVIYLFLRDIVPTLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAVGLLVDNAIVVLENIDRCRKLGMNKL
DAAVTGTKEVAGAIFASTMTTLAVFVPLVFVDGVAGALFSDQALTVTFALLASLLVALTT
IPMLASREGFKALPHLVQKREKPVLDTKLAKVKHYGATVCSFPFVLLFSYLPSLLLTLAL
MLSRAFSWLAGLIMRPISLAFNWFYHLLERVYHKLLRQALKFTWVTLAIALTLTLGTMSL
IPRLGMELIPPMNQGEFYVEVLLPPGTEVSETDRVLQKLALSIKDREDVKHAYSQAGSGG
LMTSDTSRGGENWGRLQVVLADHQAFDAVTHVLRTTAMRIPELEAKIQHPELFSFKTPLE
IEVIGYDLTQLKQTADNLISALSDSDRFADLNTSLRDGQPELSIRFDHARLAALGMDAPT
VANRIAQRIGGTVASQYTVRDRKIDILVRSELEERDQISDIDSMIINPNSNQPIPLSAVA
DVSLNLGPSAINRISQQRVAIVSANLAYGDLNDAVIEARSIIDQQNLPSSIQVRFGGQNE
EMEHSFQSLQIALVLAVFLVYLVMASQFESLVHPLLILIAVPMAVGGSIFGLFITQTHLS
VVVFIGLIMLAGIVVNNAIVLVDRINQLREQGMAKLTAIEEAAKSRLRPIVMTTMTTALG
LAPMALGLGDGSEVRAPMAITVIFGLSLATLLTLVVIPALYALFDRKAFDAPAEVVQEGE
SV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataattaatacttccgttaaacggccggtatccgtgtggatgtttatgctggcg
gtgatcctctttggcatggtgggtttctctcgcctggcggtgaaactcctgccggatctc
agctaccctaccatcaccatacgtacccaatatgaaggcgccgcgccggttgaggtggag
cagcttgtctctaagcccatcgaagaagccgccggtatcgttaaggggctgcgtaagata
agctccatctcccgctctggcatgtcagatgtagtgctcgaatttgaatggggcacagac
atggacatggcaagcctggaggtgagagaaaagctagacaccatagagctgcccctggat
gtgaagaagcctctgttgctgcgctttaaccctaacttagatcctatcgtgcgtctagcc
ctctccctgccagacgccgatgctcagtcgctcaagcagatgcgtacctttgccgaggag
gagcttaagcgtcagctggaatcccttagcggcgtcgctgccgtcaggctctccggtggt
ctcgaacaagaggtgcatattcagctcaatcaggagaagttgactcagcttaacctgaac
gccgataagatccgcgagcgtatcgccgccgaaaacatcaacctctctgccggtaaggtg
gtacagggcgagaaagagtatctggtgcgtaccctcaaccagttcaactccctggatgaa
ctgggtcagatcatcgtctatcgcgacaaccagaccctggtgcgtctgttcgaggtggcc
gacatcatcgacagccataaggaacgcaacgacatcacccggatcggctctgccgagtcg
atcgaactggccatctataaggaaggcgatgccaacacggttgccgtggcccgtaaagtc
accgctaaacttaacgacctcaagaagctaaacgagaaggctgagcttaaagttatctac
gatcaatccgagtttatcgagagtgcggttagcgaggtcacctcggcggcgctgatcggt
agcttactctccatgctggtgatctacctgttcctcagagacatagtgcctaccctgatc
atctccatctcgattccgttttcggtgatcgccaccttcaacatgatgtattttgccgac
atcagcctcaacatcatgtcgctgggcggtatcgccctggcggtgggcctcctggtggac
aatgccatcgtggtgctggaaaacatcgaccgctgtcgcaagctggggatgaataagctc
gacgccgccgtgacgggtaccaaagaggtggccggcgctatcttcgcctccaccatgacc
accctggcggtattcgtgccgctggtgtttgtcgacggtgttgccggcgcgcttttctcg
gatcaggcgctgacagtcaccttcgccctactggcctccctgctggtcgccctgaccacc
atccctatgttggcatcgcgtgaaggcttcaaggccctgccacacctggtgcagaaacgt
gagaagcctgtgctcgacactaagctggccaaggtgaagcattatggcgccaccgtgtgc
tccttccccttcgtgctgctgtttagttatctgccgtcactgctactgaccctggcattg
atgctgagccgcgccttttcatggcttgcaggcctgatcatgcgccccatcagccttgca
tttaactggttctatcacctgttagaaagggtttatcacaagctgctgcgccaggcgctt
aagtttacctgggtgacactggccatcgccctcaccctcaccttaggcaccatgagcctg
atcccaagactcggcatggagctgatcccgccgatgaaccagggcgagttctatgtagaa
gtcctgctgccaccgggcacagaagtcagtgagacagacagggtgttacagaagctggcc
ttgtctatcaaagacagggaagatgtaaaacatgcctacagccaagccggtagcggcggt
ctgatgacctcagacacctcgcgcggcggcgaaaactggggccgtctgcaagtggtgctg
gccgatcatcaggccttcgatgcagtcacccatgtgctgcgcaccacagccatgcgtatc
cctgagctagaggccaagatccaacatccagagctgtttagcttcaagaccccgcttgag
atagaagtgataggctatgacttaactcagctcaagcagaccgccgataatcttatcagc
gcgctgtctgactcagatcgctttgccgacctcaacaccagtctgcgtgacggtcagcca
gagctgagcatccgcttcgaccacgctcgccttgccgctttgggtatggacgcaccaacc
gtggcgaatcgtatcgcccagcgcatcggcggcacagtggccagccaatatacggttcgt
gacagaaagatcgacatcttggttcgcagcgaactcgaggagcgcgatcagataagcgac
atcgattcgatgatcatcaaccctaacagtaatcagccaatcccgctgagcgccgttgcc
gatgtctccttgaatctgggcccttctgccatcaaccgtatcagccagcagcgcgttgcc
atcgtctcggccaacctcgcctatggtgatctcaacgatgccgtgatcgaggcgagaagc
atcatagatcagcaaaatctacctagctcgattcaggtgcgcttcggcggccagaacgaa
gagatggaacactccttccagtcgcttcagatcgccctggtattggccgtcttcctggta
tatctggtgatggccagccagttcgagtcgctggtacacccactgcttattctgatcgcc
gtgcccatggcagtgggtggtagcatcttcggtctgttcatcacccagacgcacctgagc
gtggtagtgttcatcggcctcatcatgctggcgggtatcgtagtgaacaacgccatcgtc
ctggtggatcgtatcaaccagctgcgtgagcagggtatggctaaactgacggccatcgaa
gaagccgccaagtctcgcctgcgccccatcgtcatgaccaccatgaccacggcactgggt
ctggcgcctatggcactgggtttaggcgatggcagcgaggtacgtgcgcccatggcgatc
acagtgatcttcggcttgtcacttgcaacactactgacgcttgtggtgatccctgcgctc
tacgccctgttcgatcgcaaagcgtttgacgcaccagccgaagtcgtccaagagggagaa
tcagtatga
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