Shewanella aegiceratis: K0H80_10560
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Entry
K0H80_10560 CDS
T09153
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H80_10560 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_10560 (nth)
Enzymes [BR:
saeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0H80_10560 (nth)
DNA repair and recombination proteins [BR:
saeg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0H80_10560 (nth)
Prokaryotic type
K0H80_10560 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
ORC6_2nd
Motif
Other DBs
NCBI-ProteinID:
QYJ80790
LinkDB
All DBs
Position
2351072..2351713
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AA seq
213 aa
AA seq
DB search
MNTEKRRKILEIFRDNNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
AQAIYDLGIEGLKEYIKTIGLYNNKAINVIKACEILLEKHGGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVANRTKFAMGKNVDQVEQKMLKVVPAEFKVDVHHWFI
LHGRYTCVARKPRCGSCLIEEHCEFKEKVYPDE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgagaaacgtcgtaagatcctggagatctttcgcgataacaatcctaagcca
gaaaccgagcttaacttctcctctcccttcgagctgttggttgccgtcaccctgtcggcc
caggccacggacgtgagcgtcaacaaggccaccgacaagctgtttcccgtcgcaaatacc
gcccaagccatctatgacctaggcatcgaggggctcaaggaatatatcaagaccataggc
ctgtataataacaaggcaatcaacgtcatcaaggcctgcgagatcttgctggagaagcac
ggcggcgaggtgcccgaagacagggaggcgctcgaagccctgcctggcgtgggtcgtaag
accgccaacgtagtattaaacaccgccttcggctggccgaccattgccgtcgatacccat
atctttcgcgtcgccaaccgcaccaagtttgccatgggtaagaatgtagatcaggtggag
cagaagatgttaaaggtggtaccggccgagtttaaggtagatgtgcaccactggtttatt
cttcacgggcgttatacctgtgtcgcccgcaaaccaagatgtggcagttgtttgattgaa
gagcactgcgagtttaaagagaaggtctatccagacgaatag
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