Shewanella aestuarii: HBH39_08170
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Entry
HBH39_08170 CDS
T06921
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saes
Shewanella aestuarii
Pathway
saes01501
beta-Lactam resistance
saes01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBH39_08170
01503 Cationic antimicrobial peptide (CAMP) resistance
HBH39_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saes03036
]
HBH39_08170
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saes02000
]
HBH39_08170
01504 Antimicrobial resistance genes [BR:
saes01504
]
HBH39_08170
Chromosome and associated proteins [BR:
saes03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HBH39_08170
Transporters [BR:
saes02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HBH39_08170
Antimicrobial resistance genes [BR:
saes01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBH39_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF7801
Motif
Other DBs
NCBI-ProteinID:
QIR14461
UniProt:
A0A6G9QKT9
LinkDB
All DBs
Position
PN3F2:1790747..1791829
Genome browser
AA seq
360 aa
AA seq
DB search
MKKIFLILAICGIGFYAYKTMQPQQTMAQRPKAIPNVVVAYAKLMPIRDEVEAIGTGKAN
ESITVTSKITEVVTEINFEDGDLVPKDKVLVQLQDAEQQAKVNAAKVKLKEHLREFERIS
SLVTSKTVAELERDRLQSLIDSARAELDQANSALTDRAISSPFAGRLGLRQVSVGSLVST
GEKITTLDDVSKIKLDFSVPERFIQQLQAGKLVEASAVAFPGRVFKGEVTSIDSRVNPAT
RAVMVRAIIPNDDLALLPGMLMKVKLIKQSREGLLLPESAIIPIQDKHYIYSTNQDNEVI
QIEVKLGVRMRGWVEIVDGLSVGEQVLIRGILKVRPGDKVTIQEAENFNFVQIETAEKSA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattcctaatacttgctatctgtggcattggtttttatgcatacaaaaca
atgcaacctcaacaaacaatggctcaacgtccaaaggctattcctaacgtggtggtggca
tatgccaagttaatgcccattcgtgatgaagtcgaggcaattggcactggcaaagcaaat
gaatcaataacggttacttcaaaaattaccgaagtggtaactgaaattaactttgaggat
ggcgatttagtgccaaaagataaagtgctggttcagttacaagatgctgagcaacaggcc
aaagttaatgctgcaaaagtaaagctcaaagagcatctgcgagagtttgaacgtatcagt
agcttggttaccagtaaaaccgttgctgagttagaacgtgatagattacaaagcttaatc
gactctgccagagcagagcttgatcaagctaattcggcactaaccgacagggctatttca
tcgccatttgccggtcgtcttggcttgcgtcaagttagtgtgggcagtttagtgtcaact
ggtgagaaaatcactaccttggatgatgtcagtaaaattaagctcgatttctctgttcct
gagcgctttattcagcagttgcaagcggggaaattagttgaagccagcgcagtcgccttt
cctggtcgtgtttttaaaggtgaggtgacctctattgacagtcgagttaacccagcaaca
cgtgccgttatggtacgtgcaattatcccaaatgatgaccttgcactgttaccgggtatg
ttgatgaaagtaaaattaatcaaacaaagccgtgaaggattgctactgcctgagtctgcc
attattcctattcaagataagcattatatttacagtactaaccaagacaatgaagtgatc
caaattgaggtcaaacttggtgttagaatgcgtggctgggttgagattgttgacggctta
tctgtgggtgaacaagtgcttatccgcggtattttgaaagtaagacctggtgataaagtt
actatccaagaggcggaaaacttcaattttgtacaaattgaaacagcggagaaatcagca
tga
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