Shewanella aestuarii: HBH39_16875
Help
Entry
HBH39_16875 CDS
T06921
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saes
Shewanella aestuarii
Pathway
saes01501
beta-Lactam resistance
saes01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBH39_16875
01503 Cationic antimicrobial peptide (CAMP) resistance
HBH39_16875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saes03036
]
HBH39_16875
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saes02000
]
HBH39_16875
01504 Antimicrobial resistance genes [BR:
saes01504
]
HBH39_16875
Chromosome and associated proteins [BR:
saes03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HBH39_16875
Transporters [BR:
saes02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HBH39_16875
Antimicrobial resistance genes [BR:
saes01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBH39_16875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Tab2-like_C
PMSR
Motif
Other DBs
NCBI-ProteinID:
QIR15939
UniProt:
A0A6G9QQ45
LinkDB
All DBs
Position
PN3F2:3886382..3887524
Genome browser
AA seq
380 aa
AA seq
DB search
MHKAFKVAAVITATLWLTACGQQGQDSQSQQPPAASVGVMTVKTQEQSILVELPGRSRAF
LEAEVRPQVSGIITSRGFTEGSEVEAGQSLYQIDPASYKAILTSAKADLARAEAVLYSAA
AKAKRYKNLIKTNNISEQDYIEAEAAHQEALASVEVAKAQINSAKINVEYTEVKAPISGR
IGKSSVTPGALVTANQSTTLATIQQLDPINVDITQSSAQMLRLQTQLKAGKLQKAENALV
TLVLEDGSIYDQQGVLKFAEVSVDEATGSVIIRAEFPNPDGILLPGMYVRARVATGTDPK
AILVPQKAITRNTKGEAVAMIVNAENIVEMRVVRTAEVIDNNWRIVGGLNVGDKVIIEGL
QKIRPGVTVSPQAISANSAQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagcattcaaagttgccgcagtaataactgccacattatggttaacggcctgt
ggtcagcaagggcaagacagccagtcacagcaacctccggccgcttccgttggcgtaatg
acagtgaaaactcaagaacaatctattctggttgagttaccaggtcgcagtcgtgctttt
cttgaggcagaagttcgtcctcaagtttcaggtattattacctcaagaggctttactgaa
ggcagcgaagttgaagctggccagtctttataccaaattgatcctgcctcatataaggca
atattaaccagtgccaaagctgatttagcgcgcgctgaagcagtattatactcagccgca
gcgaaagcgaagcgatacaaaaatctaattaaaaccaataacatttctgaacaagattac
attgaagcagaagcagcacaccaagaagcgttagcttctgttgaagtagctaaggcgcaa
attaatagcgcaaaaatcaatgttgaatacacagaagtaaaagcgccaatttcaggccgt
attggtaagtcatcagttacacctggagcactagtcacagctaatcaaagcacgacgtta
gcaaccattcagcaattagacccgataaatgttgatattacacagtcaagcgcacagatg
ttgcgtctacaaacacaacttaaagcgggtaagttacaaaaagcagagaacgccttagtg
actttagtgcttgaagatggctccatttatgaccaacaaggtgtgctcaagtttgctgaa
gtgagtgttgacgaagctacaggttcggtcattattcgcgctgagttccctaaccctgat
ggcatattattaccaggtatgtatgtacgtgctcgtgttgcaacgggtaccgatccaaaa
gcgattttagtaccacaaaaagccattactcgtaacaccaaaggtgaagctgtagcaatg
attgttaatgctgaaaacattgttgaaatgcgtgtagtaagaacggcagaagtcattgac
aataattggcgaattgttgggggcttaaatgttggcgacaaagttattattgaaggttta
caaaaaattcgccctggcgtaactgtttcaccgcaagcaatcagtgctaactcagcccaa
taa
DBGET
integrated database retrieval system
